Analysis of Ligand-Protein Contacts in PDB entry:
6V08


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 35 ligands in PDB entry 6V08. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
B
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
B
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
B
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
B
4 11ALPHA-D-MANNOPYRANOSE
lig 5
NAG
B
5 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
MAN
B
6 11ALPHA-D-MANNOPYRANOSE
lig 7
MAN
B
7 11ALPHA-D-MANNOPYRANOSE
lig 8
NAG
B
8 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
BMA
C
3 11BETA-D-MANNOPYRANOSE
lig 12
MAN
C
4 11ALPHA-D-MANNOPYRANOSE
lig 13
NAG
C
5 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
BMA
C
6 11BETA-D-MANNOPYRANOSE
lig 15
MAN
C
7 11ALPHA-D-MANNOPYRANOSE
lig 16
NAG
C
8 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 18
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 19
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 20
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
MAN
E
3 11ALPHA-D-MANNOPYRANOSE
lig 22
BMA
E
4 11BETA-D-MANNOPYRANOSE
lig 23
MAN
E
5 11ALPHA-D-MANNOPYRANOSE
lig 24
SO4
A
424 5SULFATE ION
lig 25
SO4
A
425 5SULFATE ION
lig 26
SO4
A
426 5SULFATE ION
lig 27
SO4
A
427 5SULFATE ION
lig 28
SO4
A
428 5SULFATE ION
lig 29
SO4
A
429 5SULFATE ION
lig 30
SO4
A
430 5SULFATE ION
lig 31
SO4
A
431 5SULFATE ION
lig 32
SO4
A
432 5SULFATE ION
lig 33
SO4
A
433 5SULFATE ION
lig 34
SO4
A
434 5SULFATE ION
lig 35
SO4
A
435 5SULFATE ION