Analysis of Ligand-Protein Contacts in PDB entry:
6VB9


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 26 ligands in PDB entry 6VB9. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
QVA
A
191 15 HYDROXYBUTANEDIOIC ACID
lig 2
QVA
B
191 15 HYDROXYBUTANEDIOIC ACID
lig 3
QVA
C
191 15 HYDROXYBUTANEDIOIC ACID
lig 4
QVA
D
191 15 HYDROXYBUTANEDIOIC ACID
lig 5
MG
A
501 1MAGNESIUM ION
lig 6
MG
A
502 1MAGNESIUM ION
lig 7
OXD
A
503 6OXALIC ACID
lig 8
ACY
A
504 4ACETIC ACID
lig 9
ACY
A
505 4ACETIC ACID
lig 10
MG
B
501 1MAGNESIUM ION
lig 11
PEG
B
502 7DI(HYDROXYETHYL)ETHER
lig 12
OXD
B
503 6OXALIC ACID
lig 13
ACY
B
504 4ACETIC ACID
lig 14
ACY
B
505 4ACETIC ACID
lig 15
ACY
B
506 4ACETIC ACID
lig 16
MG
C
501 1MAGNESIUM ION
lig 17
MG
C
502 1MAGNESIUM ION
lig 18
PEG
C
503 7DI(HYDROXYETHYL)ETHER
lig 19
OXD
C
504 6OXALIC ACID
lig 20
ACY
C
505 4ACETIC ACID
lig 21
MG
D
501 1MAGNESIUM ION
lig 22
MG
D
502 1MAGNESIUM ION
lig 23
OXD
D
503 6OXALIC ACID
lig 24
ACY
D
504 4ACETIC ACID
lig 25
ACY
D
505 4ACETIC ACID
lig 26
ACY
D
506 4ACETIC ACID