Analysis of Ligand-Protein Contacts in PDB entry:
6VDB


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 25 ligands in PDB entry 6VDB. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
SAH
A
1901 26S-ADENOSYL-L-HOMOCYSTEINE
lig 2
UNX
A
1902 1UNKNOWN ATOM OR ION
lig 3
UNX
A
1903 1UNKNOWN ATOM OR ION
lig 4
UNX
A
1904 1UNKNOWN ATOM OR ION
lig 5
UNX
A
1905 1UNKNOWN ATOM OR ION
lig 6
UNX
A
1906 1UNKNOWN ATOM OR ION
lig 7
UNX
A
1907 1UNKNOWN ATOM OR ION
lig 8
UNX
A
1908 1UNKNOWN ATOM OR ION
lig 9
UNX
A
1909 1UNKNOWN ATOM OR ION
lig 10
UNX
A
1910 1UNKNOWN ATOM OR ION
lig 11
UNX
A
1911 1UNKNOWN ATOM OR ION
lig 12
UNX
A
1912 1UNKNOWN ATOM OR ION
lig 13
UNX
A
1913 1UNKNOWN ATOM OR ION
lig 14
UNX
A
1914 1UNKNOWN ATOM OR ION
lig 15
UNX
A
1915 1UNKNOWN ATOM OR ION
lig 16
UNX
A
1916 1UNKNOWN ATOM OR ION
lig 17
UNX
A
1917 1UNKNOWN ATOM OR ION
lig 18
UNX
A
1918 1UNKNOWN ATOM OR ION
lig 19
UNX
A
1919 1UNKNOWN ATOM OR ION
lig 20
UNX
A
1920 1UNKNOWN ATOM OR ION
lig 21
ZN
A
1921 1ZINC ION
lig 22
ZN
A
1922 1ZINC ION
lig 23
ZN
A
1923 1ZINC ION
lig 24
SCN
H
101 3THIOCYANATE ION
lig 25
UNX
H
102 1UNKNOWN ATOM OR ION