Analysis of Ligand-Protein Contacts in PDB entry:
6VDW


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 17 ligands in PDB entry 6VDW. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
MNR
A
201 43PROTOPORPHYRIN IX CONTAINING MN
lig 2
NPO
A
202 10P-NITROPHENOL
lig 3
EDO
A
203 41,2-ETHANEDIOL
lig 4
EDO
A
204 41,2-ETHANEDIOL
lig 5
EDO
A
205 41,2-ETHANEDIOL
lig 6
PEG
A
206 7DI(HYDROXYETHYL)ETHER
lig 7
EDO
A
207 41,2-ETHANEDIOL
lig 8
EDO
A
208 41,2-ETHANEDIOL
lig 9
PEG
A
209 7DI(HYDROXYETHYL)ETHER
lig 10
PEG
A
210 7DI(HYDROXYETHYL)ETHER
lig 11
MNR
B
201 43PROTOPORPHYRIN IX CONTAINING MN
lig 12
NPO
B
202 10P-NITROPHENOL
lig 13
EDO
B
203 41,2-ETHANEDIOL
lig 14
EDO
B
204 41,2-ETHANEDIOL
lig 15
PEG
B
205 7DI(HYDROXYETHYL)ETHER
lig 16
SO4
B
206 5SULFATE ION
lig 17
SO4
B
207 5SULFATE ION