Analysis of Ligand-Protein Contacts in PDB entry:
6VDX


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 12 ligands in PDB entry 6VDX. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
T6C
A
301 102,4,6-TRICHLOROPHENOL
lig 2
EDO
A
302 41,2-ETHANEDIOL
lig 3
PEG
A
303 7DI(HYDROXYETHYL)ETHER
lig 4
EDO
A
304 41,2-ETHANEDIOL
lig 5
MNR
A
305 43PROTOPORPHYRIN IX CONTAINING MN
lig 6
SO4
A
306 5SULFATE ION
lig 7
SO4
A
307 5SULFATE ION
lig 8
T6C
B
301 102,4,6-TRICHLOROPHENOL
lig 9
EDO
B
302 41,2-ETHANEDIOL
lig 10
EDO
B
303 41,2-ETHANEDIOL
lig 11
MNR
B
304 43PROTOPORPHYRIN IX CONTAINING MN
lig 12
SO4
B
305 5SULFATE ION