Analysis of Ligand-Protein Contacts in PDB entry:
6VFQ


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 19 ligands in PDB entry 6VFQ. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
B
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
B
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
FUC
B
3 10ALPHA-L-FUCOPYRANOSE
lig 4
CA
A
501 1CALCIUM ION
lig 5
CA
A
502 1CALCIUM ION
lig 6
CA
A
503 1CALCIUM ION
lig 7
CA
A
504 1CALCIUM ION
lig 8
CA
A
505 1CALCIUM ION
lig 9
CA
A
506 1CALCIUM ION
lig 10
CA
A
507 1CALCIUM ION
lig 11
CA
A
508 1CALCIUM ION
lig 12
CA
A
509 1CALCIUM ION
lig 13
MAN
A
510 11ALPHA-D-MANNOPYRANOSE
lig 14
MAN
A
511 11ALPHA-D-MANNOPYRANOSE
lig 15
ACT
A
515 4ACETATE ION
lig 16
EDO
A
516 41,2-ETHANEDIOL
lig 17
EDO
A
517 41,2-ETHANEDIOL
lig 18
EDO
A
518 41,2-ETHANEDIOL
lig 19
EDO
A
519 41,2-ETHANEDIOL