Analysis of Ligand-Protein Contacts in PDB entry:
6VG4


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 26 ligands in PDB entry 6VG4. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
B
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
B
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
BMA
C
3 11BETA-D-MANNOPYRANOSE
lig 6
CA
A
703 1CALCIUM ION
lig 7
CA
A
704 1CALCIUM ION
lig 8
CA
A
705 1CALCIUM ION
lig 9
CA
A
706 1CALCIUM ION
lig 10
CA
A
707 1CALCIUM ION
lig 11
CA
A
708 1CALCIUM ION
lig 12
CA
A
709 1CALCIUM ION
lig 13
CA
A
710 1CALCIUM ION
lig 14
CA
A
711 1CALCIUM ION
lig 15
CA
A
712 1CALCIUM ION
lig 16
CA
A
713 1CALCIUM ION
lig 17
CA
A
714 1CALCIUM ION
lig 18
CA
A
715 1CALCIUM ION
lig 19
CA
A
716 1CALCIUM ION
lig 20
CA
A
717 1CALCIUM ION
lig 21
MAN
A
718 11ALPHA-D-MANNOPYRANOSE
lig 22
MAN
A
719 11ALPHA-D-MANNOPYRANOSE
lig 23
MAN
A
720 11ALPHA-D-MANNOPYRANOSE
lig 24
TAM
A
724 11TRIS(HYDROXYETHYL)AMINOMETHANE
lig 25
CL
A
725 1CHLORIDE ION
lig 26
NA
A
726 1SODIUM ION