Analysis of Ligand-Protein Contacts in PDB entry:
6VI0


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 135 ligands in PDB entry 6VI0. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
M
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
M
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
N
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
N
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
BMA
N
3 11BETA-D-MANNOPYRANOSE
lig 6
MAN
N
4 11ALPHA-D-MANNOPYRANOSE
lig 7
NAG
O
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
O
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
BMA
O
3 11BETA-D-MANNOPYRANOSE
lig 10
MAN
O
4 11ALPHA-D-MANNOPYRANOSE
lig 11
MAN
O
5 11ALPHA-D-MANNOPYRANOSE
lig 12
MAN
O
6 11ALPHA-D-MANNOPYRANOSE
lig 13
NAG
P
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
NAG
P
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
BMA
P
3 11BETA-D-MANNOPYRANOSE
lig 16
MAN
P
4 11ALPHA-D-MANNOPYRANOSE
lig 17
MAN
P
5 11ALPHA-D-MANNOPYRANOSE
lig 18
MAN
P
6 11ALPHA-D-MANNOPYRANOSE
lig 19
MAN
P
7 11ALPHA-D-MANNOPYRANOSE
lig 20
MAN
P
8 11ALPHA-D-MANNOPYRANOSE
lig 21
NAG
Q
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 22
NAG
Q
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 23
NAG
R
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 24
NAG
R
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 25
BMA
R
3 11BETA-D-MANNOPYRANOSE
lig 26
MAN
R
4 11ALPHA-D-MANNOPYRANOSE
lig 27
MAN
R
5 11ALPHA-D-MANNOPYRANOSE
lig 28
MAN
R
6 11ALPHA-D-MANNOPYRANOSE
lig 29
NAG
S
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 30
NAG
S
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 31
BMA
S
3 11BETA-D-MANNOPYRANOSE
lig 32
NAG
T
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 33
NAG
T
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 34
NAG
U
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 35
NAG
U
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 36
NAG
V
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 37
NAG
V
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 38
BMA
V
3 11BETA-D-MANNOPYRANOSE
lig 39
MAN
V
4 11ALPHA-D-MANNOPYRANOSE
lig 40
NAG
W
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 41
NAG
W
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 42
BMA
W
3 11BETA-D-MANNOPYRANOSE
lig 43
MAN
W
4 11ALPHA-D-MANNOPYRANOSE
lig 44
MAN
W
5 11ALPHA-D-MANNOPYRANOSE
lig 45
MAN
W
6 11ALPHA-D-MANNOPYRANOSE
lig 46
NAG
X
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 47
NAG
X
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 48
BMA
X
3 11BETA-D-MANNOPYRANOSE
lig 49
MAN
X
4 11ALPHA-D-MANNOPYRANOSE
lig 50
MAN
X
5 11ALPHA-D-MANNOPYRANOSE
lig 51
MAN
X
6 11ALPHA-D-MANNOPYRANOSE
lig 52
MAN
X
7 11ALPHA-D-MANNOPYRANOSE
lig 53
MAN
X
8 11ALPHA-D-MANNOPYRANOSE
lig 54
NAG
Y
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 55
NAG
Y
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 56
NAG
Z
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 57
NAG
Z
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 58
BMA
Z
3 11BETA-D-MANNOPYRANOSE
lig 59
MAN
Z
4 11ALPHA-D-MANNOPYRANOSE
lig 60
MAN
Z
5 11ALPHA-D-MANNOPYRANOSE
lig 61
MAN
Z
6 11ALPHA-D-MANNOPYRANOSE
lig 62
NAG
a
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 63
NAG
a
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 64
BMA
a
3 11BETA-D-MANNOPYRANOSE
lig 65
NAG
b
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 66
NAG
b
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 67
NAG
c
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 68
NAG
c
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 69
NAG
d
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 70
NAG
d
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 71
BMA
d
3 11BETA-D-MANNOPYRANOSE
lig 72
MAN
d
4 11ALPHA-D-MANNOPYRANOSE
lig 73
NAG
e
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 74
NAG
e
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 75
BMA
e
3 11BETA-D-MANNOPYRANOSE
lig 76
MAN
e
4 11ALPHA-D-MANNOPYRANOSE
lig 77
MAN
e
5 11ALPHA-D-MANNOPYRANOSE
lig 78
MAN
e
6 11ALPHA-D-MANNOPYRANOSE
lig 79
NAG
f
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 80
NAG
f
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 81
BMA
f
3 11BETA-D-MANNOPYRANOSE
lig 82
MAN
f
4 11ALPHA-D-MANNOPYRANOSE
lig 83
MAN
f
5 11ALPHA-D-MANNOPYRANOSE
lig 84
MAN
f
6 11ALPHA-D-MANNOPYRANOSE
lig 85
MAN
f
7 11ALPHA-D-MANNOPYRANOSE
lig 86
MAN
f
8 11ALPHA-D-MANNOPYRANOSE
lig 87
NAG
g
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 88
NAG
g
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 89
NAG
h
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 90
NAG
h
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 91
BMA
h
3 11BETA-D-MANNOPYRANOSE
lig 92
MAN
h
4 11ALPHA-D-MANNOPYRANOSE
lig 93
MAN
h
5 11ALPHA-D-MANNOPYRANOSE
lig 94
MAN
h
6 11ALPHA-D-MANNOPYRANOSE
lig 95
NAG
i
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 96
NAG
i
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 97
BMA
i
3 11BETA-D-MANNOPYRANOSE
lig 98
NAG
j
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 99
NAG
j
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 100
NAG
B
1611 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 101
NAG
B
1637 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 102
NAG
G
1088 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 103
NAG
G
1133 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 104
NAG
G
1156 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 105
NAG
G
1234 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 106
NAG
G
1301 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 107
NAG
G
1332 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 108
NAG
G
1339 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 109
NAG
G
1355 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 110
NAG
G
1392 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 111
NAG
L
1072 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 112
NAG
A
1611 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 113
NAG
A
1637 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 114
NAG
C
1088 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 115
NAG
C
1133 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 116
NAG
C
1156 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 117
NAG
C
1234 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 118
NAG
C
1301 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 119
NAG
C
1332 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 120
NAG
C
1339 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 121
NAG
C
1355 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 122
NAG
C
1392 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 123
NAG
D
1072 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 124
NAG
F
1611 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 125
NAG
F
1637 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 126
NAG
I
1088 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 127
NAG
I
1133 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 128
NAG
I
1156 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 129
NAG
I
1234 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 130
NAG
I
1301 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 131
NAG
I
1332 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 132
NAG
I
1339 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 133
NAG
I
1355 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 134
NAG
I
1392 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 135
NAG
J
1072 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE