Analysis of Ligand-Protein Contacts in PDB entry:
6VM3


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 20 ligands in PDB entry 6VM3. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
F
2 132-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
G
2 132-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
H
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
NAG
H
2 132-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
I
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
I
2 132-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
J
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
J
2 132-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
GLY
A
601 5GLYCINE
lig 12
IVM
A
604 62 ALPHA-L-ARABINO-HEXOPYRANOSIDE
lig 13
IVM
E
901 62 ALPHA-L-ARABINO-HEXOPYRANOSIDE
lig 14
IVM
C
503 62 ALPHA-L-ARABINO-HEXOPYRANOSIDE
lig 15
GLY
B
601 5GLYCINE
lig 16
GLY
B
602 5GLYCINE
lig 17
IVM
B
603 62 ALPHA-L-ARABINO-HEXOPYRANOSIDE
lig 18
GLY
D
601 5GLYCINE
lig 19
GLY
D
602 5GLYCINE
lig 20
IVM
D
603 62 ALPHA-L-ARABINO-HEXOPYRANOSIDE