Analysis of Ligand-Protein Contacts in PDB entry:
6VP4


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 13 ligands in PDB entry 6VP4. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
FE
A
401 1FE (III) ION
lig 2
AKG
A
402 102-OXOGLUTARIC ACID
lig 3
ARG
A
403 12ARGININE
lig 4
FE
B
401 1FE (III) ION
lig 5
AKG
B
402 102-OXOGLUTARIC ACID
lig 6
ARG
B
403 12ARGININE
lig 7
FE
C
401 1FE (III) ION
lig 8
AKG
C
402 102-OXOGLUTARIC ACID
lig 9
ARG
C
403 12ARGININE
lig 10
FE
D
401 1FE (III) ION
lig 11
AKG
D
402 102-OXOGLUTARIC ACID
lig 12
ARG
D
403 12ARGININE
lig 13
B3P
D
404 19 PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-