Analysis of Ligand-Protein Contacts in PDB entry:
6VPH


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOTHREONINE (TPO) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 12 ligands in PDB entry 6VPH. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
CAS
A
247 9S-(DIMETHYLARSENIC)CYSTEINE
lig 2
TPO
A
287 11PHOSPHOTHREONINE
lig 3
TPO
A
288 11PHOSPHOTHREONINE
lig 4
CAS
A
290 9S-(DIMETHYLARSENIC)CYSTEINE
lig 5
CL
A
601 1CHLORIDE ION
lig 6
CL
A
602 1CHLORIDE ION
lig 7
DTD
A
603 8DITHIANE DIOL
lig 8
ANP
A
604 31PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTE
lig 9
GOL
A
605 6GLYCEROL
lig 10
GOL
A
606 6GLYCEROL
lig 11
GOL
A
607 6GLYCEROL
lig 12
GOL
A
608 6GLYCEROL