Analysis of Ligand-Protein Contacts in PDB entry:
6VY2


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 180 ligands in PDB entry 6VY2. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
G
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
K
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
K
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
O
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
NAG
O
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
BMA
O
3 11BETA-D-MANNOPYRANOSE
lig 8
NAG
P
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
P
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
Q
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
NAG
Q
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
BMA
Q
3 11BETA-D-MANNOPYRANOSE
lig 13
MAN
Q
4 11ALPHA-D-MANNOPYRANOSE
lig 14
MAN
Q
5 11ALPHA-D-MANNOPYRANOSE
lig 15
NAG
R
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
NAG
R
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
BMA
R
3 11BETA-D-MANNOPYRANOSE
lig 18
NAG
S
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 19
NAG
S
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 20
BMA
S
3 11BETA-D-MANNOPYRANOSE
lig 21
MAN
S
4 11ALPHA-D-MANNOPYRANOSE
lig 22
NAG
T
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 23
NAG
T
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 24
BMA
T
3 11BETA-D-MANNOPYRANOSE
lig 25
MAN
T
4 11ALPHA-D-MANNOPYRANOSE
lig 26
MAN
T
5 11ALPHA-D-MANNOPYRANOSE
lig 27
NAG
U
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 28
NAG
U
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 29
BMA
U
3 11BETA-D-MANNOPYRANOSE
lig 30
NAG
V
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 31
NAG
V
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 32
BMA
V
3 11BETA-D-MANNOPYRANOSE
lig 33
NAG
W
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 34
NAG
W
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 35
NAG
X
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 36
NAG
X
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 37
BMA
X
3 11BETA-D-MANNOPYRANOSE
lig 38
NAG
Y
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 39
NAG
Y
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 40
BMA
Y
3 11BETA-D-MANNOPYRANOSE
lig 41
MAN
Y
4 11ALPHA-D-MANNOPYRANOSE
lig 42
MAN
Y
5 11ALPHA-D-MANNOPYRANOSE
lig 43
MAN
Y
6 11ALPHA-D-MANNOPYRANOSE
lig 44
MAN
Y
7 11ALPHA-D-MANNOPYRANOSE
lig 45
NAG
Z
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 46
NAG
Z
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 47
BMA
Z
3 11BETA-D-MANNOPYRANOSE
lig 48
NAG
a
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 49
NAG
a
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 50
BMA
a
3 11BETA-D-MANNOPYRANOSE
lig 51
NAG
b
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 52
NAG
b
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 53
NAG
c
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 54
NAG
c
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 55
NAG
d
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 56
NAG
d
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 57
NAG
e
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 58
NAG
e
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 59
BMA
e
3 11BETA-D-MANNOPYRANOSE
lig 60
NAG
f
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 61
NAG
f
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 62
NAG
g
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 63
NAG
g
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 64
BMA
g
3 11BETA-D-MANNOPYRANOSE
lig 65
MAN
g
4 11ALPHA-D-MANNOPYRANOSE
lig 66
MAN
g
5 11ALPHA-D-MANNOPYRANOSE
lig 67
NAG
h
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 68
NAG
h
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 69
BMA
h
3 11BETA-D-MANNOPYRANOSE
lig 70
NAG
i
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 71
NAG
i
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 72
BMA
i
3 11BETA-D-MANNOPYRANOSE
lig 73
MAN
i
4 11ALPHA-D-MANNOPYRANOSE
lig 74
NAG
j
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 75
NAG
j
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 76
BMA
j
3 11BETA-D-MANNOPYRANOSE
lig 77
MAN
j
4 11ALPHA-D-MANNOPYRANOSE
lig 78
MAN
j
5 11ALPHA-D-MANNOPYRANOSE
lig 79
NAG
k
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 80
NAG
k
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 81
BMA
k
3 11BETA-D-MANNOPYRANOSE
lig 82
NAG
l
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 83
NAG
l
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 84
BMA
l
3 11BETA-D-MANNOPYRANOSE
lig 85
NAG
m
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 86
NAG
m
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 87
NAG
n
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 88
NAG
n
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 89
BMA
n
3 11BETA-D-MANNOPYRANOSE
lig 90
NAG
o
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 91
NAG
o
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 92
BMA
o
3 11BETA-D-MANNOPYRANOSE
lig 93
MAN
o
4 11ALPHA-D-MANNOPYRANOSE
lig 94
MAN
o
5 11ALPHA-D-MANNOPYRANOSE
lig 95
MAN
o
6 11ALPHA-D-MANNOPYRANOSE
lig 96
MAN
o
7 11ALPHA-D-MANNOPYRANOSE
lig 97
NAG
p
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 98
NAG
p
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 99
BMA
p
3 11BETA-D-MANNOPYRANOSE
lig 100
NAG
q
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 101
NAG
q
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 102
BMA
q
3 11BETA-D-MANNOPYRANOSE
lig 103
NAG
r
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 104
NAG
r
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 105
NAG
s
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 106
NAG
s
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 107
NAG
t
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 108
NAG
t
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 109
NAG
u
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 110
NAG
u
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 111
BMA
u
3 11BETA-D-MANNOPYRANOSE
lig 112
NAG
v
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 113
NAG
v
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 114
NAG
w
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 115
NAG
w
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 116
BMA
w
3 11BETA-D-MANNOPYRANOSE
lig 117
MAN
w
4 11ALPHA-D-MANNOPYRANOSE
lig 118
MAN
w
5 11ALPHA-D-MANNOPYRANOSE
lig 119
NAG
x
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 120
NAG
x
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 121
BMA
x
3 11BETA-D-MANNOPYRANOSE
lig 122
NAG
y
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 123
NAG
y
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 124
BMA
y
3 11BETA-D-MANNOPYRANOSE
lig 125
MAN
y
4 11ALPHA-D-MANNOPYRANOSE
lig 126
NAG
z
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 127
NAG
z
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 128
BMA
z
3 11BETA-D-MANNOPYRANOSE
lig 129
MAN
z
4 11ALPHA-D-MANNOPYRANOSE
lig 130
MAN
z
5 11ALPHA-D-MANNOPYRANOSE
lig 131
NAG
0
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 132
NAG
0
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 133
BMA
0
3 11BETA-D-MANNOPYRANOSE
lig 134
NAG
1
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 135
NAG
1
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 136
BMA
1
3 11BETA-D-MANNOPYRANOSE
lig 137
NAG
2
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 138
NAG
2
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 139
NAG
3
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 140
NAG
3
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 141
BMA
3
3 11BETA-D-MANNOPYRANOSE
lig 142
NAG
4
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 143
NAG
4
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 144
BMA
4
3 11BETA-D-MANNOPYRANOSE
lig 145
MAN
4
4 11ALPHA-D-MANNOPYRANOSE
lig 146
MAN
4
5 11ALPHA-D-MANNOPYRANOSE
lig 147
MAN
4
6 11ALPHA-D-MANNOPYRANOSE
lig 148
MAN
4
7 11ALPHA-D-MANNOPYRANOSE
lig 149
NAG
5
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 150
NAG
5
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 151
BMA
5
3 11BETA-D-MANNOPYRANOSE
lig 152
NAG
6
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 153
NAG
6
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 154
BMA
6
3 11BETA-D-MANNOPYRANOSE
lig 155
NAG
7
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 156
NAG
7
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 157
NAG
A
608 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 158
NAG
A
611 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 159
NAG
A
635 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 160
NAG
A
641 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 161
NAG
A
652 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 162
NAG
B
701 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 163
NAG
B
702 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 164
NAG
B
703 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 165
NAG
C
608 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 166
NAG
C
611 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 167
NAG
C
635 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 168
NAG
C
641 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 169
NAG
C
652 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 170
NAG
D
701 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 171
NAG
D
702 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 172
NAG
D
703 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 173
NAG
E
608 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 174
NAG
E
611 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 175
NAG
E
635 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 176
NAG
E
641 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 177
NAG
E
652 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 178
NAG
F
701 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 179
NAG
F
702 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 180
NAG
F
703 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE