Analysis of Ligand-Protein Contacts in PDB entry:
6VYA


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 48 ligands in PDB entry 6VYA. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
QRP
C
501 21 A]PYRAZINE-1,4-DIONE
lig 2
DST
C
502 14DIMETHYLALLYL S-THIOLODIPHOSPHATE
lig 3
QRP
A
501 21 A]PYRAZINE-1,4-DIONE
lig 4
DST
A
502 14DIMETHYLALLYL S-THIOLODIPHOSPHATE
lig 5
QRP
V
501 21 A]PYRAZINE-1,4-DIONE
lig 6
DST
V
502 14DIMETHYLALLYL S-THIOLODIPHOSPHATE
lig 7
QRP
E
501 21 A]PYRAZINE-1,4-DIONE
lig 8
DST
E
502 14DIMETHYLALLYL S-THIOLODIPHOSPHATE
lig 9
QRP
G
501 21 A]PYRAZINE-1,4-DIONE
lig 10
DST
G
502 14DIMETHYLALLYL S-THIOLODIPHOSPHATE
lig 11
QRP
B
501 21 A]PYRAZINE-1,4-DIONE
lig 12
DST
B
502 14DIMETHYLALLYL S-THIOLODIPHOSPHATE
lig 13
QRP
D
501 21 A]PYRAZINE-1,4-DIONE
lig 14
DST
D
502 14DIMETHYLALLYL S-THIOLODIPHOSPHATE
lig 15
QRP
F
501 21 A]PYRAZINE-1,4-DIONE
lig 16
DST
F
502 14DIMETHYLALLYL S-THIOLODIPHOSPHATE
lig 17
QRP
H
501 21 A]PYRAZINE-1,4-DIONE
lig 18
DST
H
502 14DIMETHYLALLYL S-THIOLODIPHOSPHATE
lig 19
QRP
I
501 21 A]PYRAZINE-1,4-DIONE
lig 20
DST
I
502 14DIMETHYLALLYL S-THIOLODIPHOSPHATE
lig 21
QRP
J
501 21 A]PYRAZINE-1,4-DIONE
lig 22
DST
J
502 14DIMETHYLALLYL S-THIOLODIPHOSPHATE
lig 23
QRP
K
501 21 A]PYRAZINE-1,4-DIONE
lig 24
DST
K
502 14DIMETHYLALLYL S-THIOLODIPHOSPHATE
lig 25
QRP
L
501 21 A]PYRAZINE-1,4-DIONE
lig 26
DST
L
502 14DIMETHYLALLYL S-THIOLODIPHOSPHATE
lig 27
QRP
M
501 21 A]PYRAZINE-1,4-DIONE
lig 28
DST
M
502 14DIMETHYLALLYL S-THIOLODIPHOSPHATE
lig 29
QRP
N
501 21 A]PYRAZINE-1,4-DIONE
lig 30
DST
N
502 14DIMETHYLALLYL S-THIOLODIPHOSPHATE
lig 31
QRP
O
501 21 A]PYRAZINE-1,4-DIONE
lig 32
DST
O
502 14DIMETHYLALLYL S-THIOLODIPHOSPHATE
lig 33
QRP
P
501 21 A]PYRAZINE-1,4-DIONE
lig 34
DST
P
502 14DIMETHYLALLYL S-THIOLODIPHOSPHATE
lig 35
QRP
Q
501 21 A]PYRAZINE-1,4-DIONE
lig 36
DST
Q
502 14DIMETHYLALLYL S-THIOLODIPHOSPHATE
lig 37
QRP
R
501 21 A]PYRAZINE-1,4-DIONE
lig 38
DST
R
502 14DIMETHYLALLYL S-THIOLODIPHOSPHATE
lig 39
QRP
S
501 21 A]PYRAZINE-1,4-DIONE
lig 40
DST
S
502 14DIMETHYLALLYL S-THIOLODIPHOSPHATE
lig 41
QRP
T
501 21 A]PYRAZINE-1,4-DIONE
lig 42
DST
T
502 14DIMETHYLALLYL S-THIOLODIPHOSPHATE
lig 43
QRP
U
501 21 A]PYRAZINE-1,4-DIONE
lig 44
DST
U
502 14DIMETHYLALLYL S-THIOLODIPHOSPHATE
lig 45
QRP
W
501 21 A]PYRAZINE-1,4-DIONE
lig 46
DST
W
502 14DIMETHYLALLYL S-THIOLODIPHOSPHATE
lig 47
QRP
X
501 21 A]PYRAZINE-1,4-DIONE
lig 48
DST
X
502 14DIMETHYLALLYL S-THIOLODIPHOSPHATE