Analysis of Ligand-Protein Contacts in PDB entry:
6VZ8


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 32 ligands in PDB entry 6VZ8. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
MG
D
701 1MAGNESIUM ION
lig 2
FAD
D
702 53FLAVIN-ADENINE DINUCLEOTIDE
lig 3
TPP
D
703 26THIAMINE DIPHOSPHATE
lig 4
MG
E
701 1MAGNESIUM ION
lig 5
FAD
E
702 53FLAVIN-ADENINE DINUCLEOTIDE
lig 6
TPP
E
703 26THIAMINE DIPHOSPHATE
lig 7
VAL
F
501 8VALINE
lig 8
VAL
G
501 8VALINE
lig 9
MG
H
701 1MAGNESIUM ION
lig 10
FAD
H
702 53FLAVIN-ADENINE DINUCLEOTIDE
lig 11
TPP
H
703 26THIAMINE DIPHOSPHATE
lig 12
MG
I
701 1MAGNESIUM ION
lig 13
FAD
I
702 53FLAVIN-ADENINE DINUCLEOTIDE
lig 14
TPP
I
703 26THIAMINE DIPHOSPHATE
lig 15
VAL
J
501 8VALINE
lig 16
VAL
K
501 8VALINE
lig 17
MG
L
701 1MAGNESIUM ION
lig 18
FAD
L
702 53FLAVIN-ADENINE DINUCLEOTIDE
lig 19
TPP
L
703 26THIAMINE DIPHOSPHATE
lig 20
MG
M
701 1MAGNESIUM ION
lig 21
FAD
M
702 53FLAVIN-ADENINE DINUCLEOTIDE
lig 22
TPP
M
703 26THIAMINE DIPHOSPHATE
lig 23
VAL
N
501 8VALINE
lig 24
VAL
O
501 8VALINE
lig 25
MG
P
701 1MAGNESIUM ION
lig 26
FAD
P
702 53FLAVIN-ADENINE DINUCLEOTIDE
lig 27
TPP
P
703 26THIAMINE DIPHOSPHATE
lig 28
MG
Q
701 1MAGNESIUM ION
lig 29
FAD
Q
702 53FLAVIN-ADENINE DINUCLEOTIDE
lig 30
TPP
Q
703 26THIAMINE DIPHOSPHATE
lig 31
VAL
R
501 8VALINE
lig 32
VAL
S
501 8VALINE