Analysis of Ligand-Protein Contacts in PDB entry:
6WM2


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 63 ligands in PDB entry 6WM2. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
BGC
W
1 12BETA-D-GLUCOPYRANOSE
lig 2
GAL
W
2 11BETA-D-GALACTOPYRANOSE
lig 3
NGA
W
3 142-ACETAMIDO-2-DEOXY-BETA-D-GALACTOPYRANOSE
lig 4
GAL
W
4 11BETA-D-GALACTOPYRANOSE
lig 5
SIA
W
5 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 6
GAL
a
1 11BETA-D-GALACTOPYRANOSE
lig 7
NGA
a
2 142-ACETAMIDO-2-DEOXY-BETA-D-GALACTOPYRANOSE
lig 8
GAL
a
3 11BETA-D-GALACTOPYRANOSE
lig 9
SIA
a
4 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 10
NAG
u
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
NAG
u
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
NAG
b
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
NAG
b
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
NAG
c
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
NAG
c
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
NAG
d
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
NAG
d
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 18
NAG
s
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 19
NAG
s
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 20
NAG
r
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
NAG
r
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 22
BMA
r
3 11BETA-D-MANNOPYRANOSE
lig 23
MAN
r
4 11ALPHA-D-MANNOPYRANOSE
lig 24
MAN
r
5 11ALPHA-D-MANNOPYRANOSE
lig 25
MAN
r
6 11ALPHA-D-MANNOPYRANOSE
lig 26
GLC
r
7 11ALPHA-D-GLUCOPYRANOSE
lig 27
GLC
r
8 11ALPHA-D-GLUCOPYRANOSE
lig 28
GLC
r
9 11ALPHA-D-GLUCOPYRANOSE
lig 29
MAN
r
10 11ALPHA-D-MANNOPYRANOSE
lig 30
MAN
r
11 11ALPHA-D-MANNOPYRANOSE
lig 31
CLR
R
901 28CHOLESTEROL
lig 32
PSF
R
902 301,2-DICAPROYL-SN-PHOSPHATIDYL-L-SERINE
lig 33
PTY
R
903 32PHOSPHATIDYLETHANOLAMINE
lig 34
PTY
R
904 29PHOSPHATIDYLETHANOLAMINE
lig 35
WSS
R
905 40 OXIDANYL-PHOSPHORYL]OXYETHYL]AZANIUM
lig 36
NAG
R
906 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 37
WJP
R
907 34 10,14,18-TETRAEN-1-YL DIHYDROGEN DIPHOSPH
lig 38
ADP
C
701 27ADENOSINE-5'-DIPHOSPHATE
lig 39
WSS
0
301 44 OXIDANYL-PHOSPHORYL]OXYETHYL]AZANIUM
lig 40
WSS
0
302 41 OXIDANYL-PHOSPHORYL]OXYETHYL]AZANIUM
lig 41
WSS
0
303 26 OXIDANYL-PHOSPHORYL]OXYETHYL]AZANIUM
lig 42
CLR
0
304 28CHOLESTEROL
lig 43
WSS
0
305 31 OXIDANYL-PHOSPHORYL]OXYETHYL]AZANIUM
lig 44
PTY
0
306 17PHOSPHATIDYLETHANOLAMINE
lig 45
PTY
0
307 48PHOSPHATIDYLETHANOLAMINE
lig 46
WSS
1
201 34 OXIDANYL-PHOSPHORYL]OXYETHYL]AZANIUM
lig 47
PTY
2
201 29PHOSPHATIDYLETHANOLAMINE
lig 48
WSS
3
201 41 OXIDANYL-PHOSPHORYL]OXYETHYL]AZANIUM
lig 49
WJS
3
202 27 PHOSPHANYL]OXY-PROPANOIC ACID
lig 50
CLR
5
201 28CHOLESTEROL
lig 51
PTY
5
202 35PHOSPHATIDYLETHANOLAMINE
lig 52
PTY
6
201 21PHOSPHATIDYLETHANOLAMINE
lig 53
PTY
7
201 42PHOSPHATIDYLETHANOLAMINE
lig 54
PTY
8
201 50PHOSPHATIDYLETHANOLAMINE
lig 55
PTY
8
202 33PHOSPHATIDYLETHANOLAMINE
lig 56
PTY
Q
401 30PHOSPHATIDYLETHANOLAMINE
lig 57
WSS
U
501 39 OXIDANYL-PHOSPHORYL]OXYETHYL]AZANIUM
lig 58
WSS
U
502 37 OXIDANYL-PHOSPHORYL]OXYETHYL]AZANIUM
lig 59
PTY
U
503 26PHOSPHATIDYLETHANOLAMINE
lig 60
NAG
U
504 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 61
WSS
V
401 37 OXIDANYL-PHOSPHORYL]OXYETHYL]AZANIUM
lig 62
CLR
V
402 28CHOLESTEROL
lig 63
PTY
V
403 29PHOSPHATIDYLETHANOLAMINE