Analysis of Ligand-Protein Contacts in PDB entry:
6WML


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 70 ligands in PDB entry 6WML. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
E
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
E
4 11ALPHA-D-MANNOPYRANOSE
lig 5
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
BMA
F
2 11BETA-D-MANNOPYRANOSE
lig 7
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
G
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
BMA
G
3 11BETA-D-MANNOPYRANOSE
lig 10
NAG
H
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
NAG
H
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
BMA
H
3 11BETA-D-MANNOPYRANOSE
lig 13
NAG
I
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
NAG
I
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
BMA
I
3 11BETA-D-MANNOPYRANOSE
lig 16
NAG
J
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
NAG
J
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 18
BMA
J
3 11BETA-D-MANNOPYRANOSE
lig 19
NAG
K
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 20
NAG
K
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
BMA
K
3 11BETA-D-MANNOPYRANOSE
lig 22
MAN
K
4 11ALPHA-D-MANNOPYRANOSE
lig 23
NAG
L
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 24
NAG
L
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 25
BMA
L
3 11BETA-D-MANNOPYRANOSE
lig 26
NAG
M
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 27
NAG
M
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 28
BMA
M
3 11BETA-D-MANNOPYRANOSE
lig 29
NAG
N
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 30
NAG
N
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 31
BMA
N
3 11BETA-D-MANNOPYRANOSE
lig 32
MAN
N
4 11ALPHA-D-MANNOPYRANOSE
lig 33
MAN
N
5 11ALPHA-D-MANNOPYRANOSE
lig 34
NAG
O
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 35
NAG
O
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 36
BMA
O
3 11BETA-D-MANNOPYRANOSE
lig 37
NAG
P
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 38
NAG
P
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 39
BMA
P
3 11BETA-D-MANNOPYRANOSE
lig 40
MAN
P
4 11ALPHA-D-MANNOPYRANOSE
lig 41
MAN
A
1005 11ALPHA-D-MANNOPYRANOSE
lig 42
NAG
A
1006 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 43
NAG
A
1009 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 44
MAN
A
1013 11ALPHA-D-MANNOPYRANOSE
lig 45
NAG
A
1014 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 46
NAG
A
1015 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 47
NAG
A
1016 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 48
U57
A
1017 21 AMINO]-2-METHYLHEXAN-1-OL
lig 49
MAN
B
1004 11ALPHA-D-MANNOPYRANOSE
lig 50
MAN
B
1005 11ALPHA-D-MANNOPYRANOSE
lig 51
NAG
B
1009 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 52
MAN
B
1013 11ALPHA-D-MANNOPYRANOSE
lig 53
MAN
B
1014 11ALPHA-D-MANNOPYRANOSE
lig 54
NAG
B
1015 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 55
NAG
B
1016 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 56
NAG
B
1017 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 57
U57
B
1018 21 AMINO]-2-METHYLHEXAN-1-OL
lig 58
MAN
C
905 11ALPHA-D-MANNOPYRANOSE
lig 59
NAG
C
909 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 60
MAN
C
913 11ALPHA-D-MANNOPYRANOSE
lig 61
MAN
C
914 11ALPHA-D-MANNOPYRANOSE
lig 62
NAG
C
915 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 63
NAG
C
916 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 64
U57
C
917 21 AMINO]-2-METHYLHEXAN-1-OL
lig 65
NAG
D
909 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 66
MAN
D
914 11ALPHA-D-MANNOPYRANOSE
lig 67
NAG
D
915 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 68
NAG
D
916 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 69
NAG
D
917 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 70
U57
D
918 21 AMINO]-2-METHYLHEXAN-1-OL