Analysis of Ligand-Protein Contacts in PDB entry:
6WYD


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 55 ligands in PDB entry 6WYD. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
CL
A
201 1CHLORIDE ION
lig 2
NAG
B
601 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
B
602 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
B
603 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
B
604 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
FUC
B
605 10ALPHA-L-FUCOPYRANOSE
lig 7
HEC
B
606 43HEME C
lig 8
NAG
B
607 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
BMA
B
608 11BETA-D-MANNOPYRANOSE
lig 10
MAN
B
609 11ALPHA-D-MANNOPYRANOSE
lig 11
MAN
B
610 11ALPHA-D-MANNOPYRANOSE
lig 12
7GD
B
611 177-BENZYL-1H-[1,2,3]TRIAZOLO[4,5-B]PYRIDIN-
lig 13
CA
B
612 1CALCIUM ION
lig 14
CL
B
613 1CHLORIDE ION
lig 15
NAG
E
601 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
BMA
E
602 11BETA-D-MANNOPYRANOSE
lig 17
MAN
E
603 11ALPHA-D-MANNOPYRANOSE
lig 18
MAN
E
604 11ALPHA-D-MANNOPYRANOSE
lig 19
NAG
E
605 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 20
NAG
E
606 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
NAG
E
607 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 22
NAG
E
608 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 23
FUC
E
609 10ALPHA-L-FUCOPYRANOSE
lig 24
HEC
E
610 43HEME C
lig 25
7GD
E
611 177-BENZYL-1H-[1,2,3]TRIAZOLO[4,5-B]PYRIDIN-
lig 26
CA
E
612 1CALCIUM ION
lig 27
CL
E
613 1CHLORIDE ION
lig 28
CL
E
614 1CHLORIDE ION
lig 29
CL
F
201 1CHLORIDE ION
lig 30
NAG
G
601 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 31
NAG
G
602 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 32
NAG
G
603 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 33
FUC
G
604 10ALPHA-L-FUCOPYRANOSE
lig 34
HEC
G
605 43HEME C
lig 35
NAG
G
606 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 36
BMA
G
607 11BETA-D-MANNOPYRANOSE
lig 37
MAN
G
608 11ALPHA-D-MANNOPYRANOSE
lig 38
MAN
G
609 11ALPHA-D-MANNOPYRANOSE
lig 39
7GD
G
610 177-BENZYL-1H-[1,2,3]TRIAZOLO[4,5-B]PYRIDIN-
lig 40
CA
G
611 1CALCIUM ION
lig 41
CL
G
612 1CHLORIDE ION
lig 42
7GD
H
201 177-BENZYL-1H-[1,2,3]TRIAZOLO[4,5-B]PYRIDIN-
lig 43
CL
H
202 1CHLORIDE ION
lig 44
NAG
I
601 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 45
BMA
I
602 11BETA-D-MANNOPYRANOSE
lig 46
MAN
I
603 11ALPHA-D-MANNOPYRANOSE
lig 47
MAN
I
604 11ALPHA-D-MANNOPYRANOSE
lig 48
NAG
I
605 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 49
NAG
I
606 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 50
NAG
I
607 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 51
NAG
I
608 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 52
FUC
I
609 10ALPHA-L-FUCOPYRANOSE
lig 53
HEC
I
610 43HEME C
lig 54
CA
I
611 1CALCIUM ION
lig 55
CL
I
612 1CHLORIDE ION