Analysis of Ligand-Protein Contacts in PDB entry:
6Y0V


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 26 ligands in PDB entry 6Y0V. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
DLY
E
9 5D-LYSINE
lig 2
NH2
E
14 1AMINO GROUP
lig 3
O65
G
102 113,5-BIS(HYDROXYMETHYL)-4-METHYL-BENZALDEHY
lig 4
DLY
G
103 5D-LYSINE
lig 5
DLY
G
104 5D-LYSINE
lig 6
DLY
G
107 9D-LYSINE
lig 7
DLY
G
110 6D-LYSINE
lig 8
NH2
G
115 1AMINO GROUP
lig 9
O65
H
102 113,5-BIS(HYDROXYMETHYL)-4-METHYL-BENZALDEHY
lig 10
DLY
H
103 5D-LYSINE
lig 11
DLY
H
104 5D-LYSINE
lig 12
DLY
H
107 9D-LYSINE
lig 13
DLY
H
110 9D-LYSINE
lig 14
NH2
H
115 1AMINO GROUP
lig 15
CA
A
301 1CALCIUM ION
lig 16
CA
A
302 1CALCIUM ION
lig 17
ZDC
E
101 133,7-ANHYDRO-2,8-DIDEOXY-L-GLYCERO-D-GLUCO-
lig 18
CA
B
301 1CALCIUM ION
lig 19
CA
B
302 1CALCIUM ION
lig 20
ZDC
B
303 133,7-ANHYDRO-2,8-DIDEOXY-L-GLYCERO-D-GLUCO-
lig 21
CA
C
301 1CALCIUM ION
lig 22
CA
C
302 1CALCIUM ION
lig 23
ZDC
G
201 133,7-ANHYDRO-2,8-DIDEOXY-L-GLYCERO-D-GLUCO-
lig 24
CA
D
301 1CALCIUM ION
lig 25
CA
D
302 1CALCIUM ION
lig 26
ZDC
H
201 133,7-ANHYDRO-2,8-DIDEOXY-L-GLYCERO-D-GLUCO-