Analysis of Ligand-Protein Contacts in PDB entry:
6Y1Z


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 45 ligands in PDB entry 6Y1Z. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
F
3 11BETA-D-MANNOPYRANOSE
lig 4
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
G
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
NAG
H
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
H
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
BMA
H
3 11BETA-D-MANNOPYRANOSE
lig 9
NAG
I
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
I
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
NAG
J
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
NAG
J
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
BMA
J
3 11BETA-D-MANNOPYRANOSE
lig 14
NAG
K
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
NAG
K
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
NAG
L
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
NAG
L
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 18
BMA
L
3 11BETA-D-MANNOPYRANOSE
lig 19
NAG
M
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 20
NAG
M
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
NAG
N
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 22
NAG
N
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 23
BMA
N
3 11BETA-D-MANNOPYRANOSE
lig 24
NAG
O
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 25
NAG
O
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 26
TRP
A
501 14TRYPTOPHAN
lig 27
HIS
A
502 10HISTIDINE
lig 28
NAG
A
503 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 29
O7B
A
504 22 ONE
lig 30
TRP
D
501 14TRYPTOPHAN
lig 31
HIS
D
502 10HISTIDINE
lig 32
NAG
D
503 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 33
O7B
D
504 22 ONE
lig 34
TRP
B
501 14TRYPTOPHAN
lig 35
HIS
B
502 10HISTIDINE
lig 36
NAG
B
503 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 37
O7B
B
504 22 ONE
lig 38
O7B
C
501 22 ONE
lig 39
TRP
C
502 14TRYPTOPHAN
lig 40
HIS
C
503 10HISTIDINE
lig 41
NAG
C
504 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 42
O7B
E
501 22 ONE
lig 43
TRP
E
502 14TRYPTOPHAN
lig 44
HIS
E
503 10HISTIDINE
lig 45
NAG
E
504 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE