Analysis of Ligand-Protein Contacts in PDB entry:
6Y5M


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 18 ligands in PDB entry 6Y5M. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
B
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
B
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
B
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
B
4 11ALPHA-D-MANNOPYRANOSE
lig 5
MAN
B
5 11ALPHA-D-MANNOPYRANOSE
lig 6
MAN
B
6 11ALPHA-D-MANNOPYRANOSE
lig 7
NAG
A
901 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
A
908 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
ZN
A
909 1ZINC ION
lig 10
ZN
A
910 1ZINC ION
lig 11
PO4
A
911 5PHOSPHATE ION
lig 12
CL
A
912 1CHLORIDE ION
lig 13
O9W
A
913 33 METHYL]-2-METHYL-PIPERAZIN-1-YL]PROP-2-EN
lig 14
CL
A
914 1CHLORIDE ION
lig 15
NA
A
915 1SODIUM ION
lig 16
NA
A
916 1SODIUM ION
lig 17
NA
A
917 1SODIUM ION
lig 18
NA
A
918 1SODIUM ION