Analysis of Ligand-Protein Contacts in PDB entry:
6Y79


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 44 ligands in PDB entry 6Y79. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
SF4
A
801 8IRON/SULFUR CLUSTER
lig 2
SF4
A
802 8IRON/SULFUR CLUSTER
lig 3
FES
A
803 4FE2/S2 (INORGANIC) CLUSTER
lig 4
SF4
B
501 8IRON/SULFUR CLUSTER
lig 5
FMN
B
502 31FLAVIN MONONUCLEOTIDE
lig 6
NDP
E
401 48 PHOSPHATE
lig 7
FES
H
301 4FE2/S2 (INORGANIC) CLUSTER
lig 8
3PE
I
501 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 9
SF4
I
502 8IRON/SULFUR CLUSTER
lig 10
SF4
I
503 8IRON/SULFUR CLUSTER
lig 11
3PE
J
201 411,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 12
LMN
J
202 69LAURYL MALTOSE NEOPENTYL GLYCOL
lig 13
3PE
J
203 441,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 14
LMN
J
204 65LAURYL MALTOSE NEOPENTYL GLYCOL
lig 15
SF4
K
301 8IRON/SULFUR CLUSTER
lig 16
ZN
M
201 1ZINC ION
lig 17
ZMP
O
201 33 BUTANOYL]-BETA-ALANYL}AMINO)ETHYL] TETRAD
lig 18
ZMP
Q
201 33 BUTANOYL]-BETA-ALANYL}AMINO)ETHYL] TETRAD
lig 19
3PE
S
501 421,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 20
PLC
W
201 41DIUNDECYL PHOSPHATIDYL CHOLINE
lig 21
PLC
W
202 42DIUNDECYL PHOSPHATIDYL CHOLINE
lig 22
CDL
X
201 86CARDIOLIPIN
lig 23
CDL
Z
201 76CARDIOLIPIN
lig 24
3PE
a
201 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 25
3PE
b
201 421,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 26
3PE
i
101 421,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 27
LMN
j
101 69LAURYL MALTOSE NEOPENTYL GLYCOL
lig 28
PLC
1
401 42DIUNDECYL PHOSPHATIDYL CHOLINE
lig 29
UQ9
1
402 35UBIQUINONE-9
lig 30
PLC
1
403 35DIUNDECYL PHOSPHATIDYL CHOLINE
lig 31
CDL
2
501 83CARDIOLIPIN
lig 32
T7X
2
502 48PHOSPHATIDYLINOSITOL
lig 33
PSC
2
503 52 17,20-DIEN-1-AMINIUM 4-OXIDE
lig 34
T7X
2
504 52PHOSPHATIDYLINOSITOL
lig 35
3PE
3
201 431,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 36
T7X
3
202 49PHOSPHATIDYLINOSITOL
lig 37
3PE
4
501 431,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 38
CDL
4
502 92CARDIOLIPIN
lig 39
3PE
4
503 421,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 40
3PE
4
504 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 41
T7X
4
505 43PHOSPHATIDYLINOSITOL
lig 42
CDL
5
701 78CARDIOLIPIN
lig 43
PLC
5
702 42DIUNDECYL PHOSPHATIDYL CHOLINE
lig 44
PLC
5
703 31DIUNDECYL PHOSPHATIDYL CHOLINE