Analysis of Ligand-Protein Contacts in PDB entry:
6Y8O


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 20 ligands in PDB entry 6Y8O. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
NOV
A
301 40NOVOBIOCIN
lig 2
EDO
A
302 41,2-ETHANEDIOL
lig 3
EDO
A
303 41,2-ETHANEDIOL
lig 4
EDO
A
304 41,2-ETHANEDIOL
lig 5
EDO
A
305 41,2-ETHANEDIOL
lig 6
EDO
A
306 41,2-ETHANEDIOL
lig 7
ACT
A
307 4ACETATE ION
lig 8
ACT
A
308 4ACETATE ION
lig 9
NA
A
309 1SODIUM ION
lig 10
NA
A
310 1SODIUM ION
lig 11
NOV
B
301 44NOVOBIOCIN
lig 12
EDO
B
302 41,2-ETHANEDIOL
lig 13
EDO
B
303 41,2-ETHANEDIOL
lig 14
EDO
B
304 41,2-ETHANEDIOL
lig 15
EDO
B
305 41,2-ETHANEDIOL
lig 16
EDO
B
306 41,2-ETHANEDIOL
lig 17
ACT
B
307 4ACETATE ION
lig 18
NA
B
308 1SODIUM ION
lig 19
NA
B
309 1SODIUM ION
lig 20
NA
B
310 1SODIUM ION