Analysis of Ligand-Protein Contacts in PDB entry:
6Y8Z


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 12 ligands in PDB entry 6Y8Z. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
SEP
A
121 10PHOSPHOSERINE
lig 2
NI
A
601 1NICKEL (II) ION
lig 3
CA
A
602 1CALCIUM ION
lig 4
NA
A
603 1SODIUM ION
lig 5
NA
A
604 1SODIUM ION
lig 6
NA
A
605 1SODIUM ION
lig 7
NA
A
606 1SODIUM ION
lig 8
GOL
A
607 6GLYCEROL
lig 9
GOL
A
608 6GLYCEROL
lig 10
GOL
A
609 6GLYCEROL
lig 11
GOL
A
610 6GLYCEROL
lig 12
ACT
A
611 4ACETATE ION