Analysis of Ligand-Protein Contacts in PDB entry:
6YA8


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 7 ligands in PDB entry 6YA8. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
SEP
B
226 10PHOSPHOSERINE
lig 2
ADP
A
601 27ADENOSINE-5'-DIPHOSPHATE
lig 3
MG
A
602 1MAGNESIUM ION
lig 4
BEF
A
603 4BERYLLIUM TRIFLUORIDE ION
lig 5
MG
A
604 1MAGNESIUM ION
lig 6
ZN
A
605 1ZINC ION
lig 7
ZN
B
401 1ZINC ION