Analysis of Ligand-Protein Contacts in PDB entry:
6YAC


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 129 ligands in PDB entry 6YAC. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
CL0
A
1011 65CHLOROPHYLL A ISOMER
lig 2
CLA
A
1012 65CHLOROPHYLL A
lig 3
CLA
A
1013 65CHLOROPHYLL A
lig 4
CLA
A
1101 65CHLOROPHYLL A
lig 5
CLA
A
1102 65CHLOROPHYLL A
lig 6
CLA
A
1103 65CHLOROPHYLL A
lig 7
CLA
A
1104 65CHLOROPHYLL A
lig 8
CLA
A
1105 60CHLOROPHYLL A
lig 9
CLA
A
1106 65CHLOROPHYLL A
lig 10
CLA
A
1107 65CHLOROPHYLL A
lig 11
CLA
A
1108 50CHLOROPHYLL A
lig 12
CLA
A
1109 65CHLOROPHYLL A
lig 13
CLA
A
1110 55CHLOROPHYLL A
lig 14
CLA
A
1111 65CHLOROPHYLL A
lig 15
CLA
A
1112 65CHLOROPHYLL A
lig 16
CLA
A
1113 45CHLOROPHYLL A
lig 17
CLA
A
1114 46CHLOROPHYLL A
lig 18
CLA
A
1115 65CHLOROPHYLL A
lig 19
CLA
A
1116 56CHLOROPHYLL A
lig 20
CLA
A
1117 65CHLOROPHYLL A
lig 21
CLA
A
1118 50CHLOROPHYLL A
lig 22
CLA
A
1119 65CHLOROPHYLL A
lig 23
CLA
A
1120 60CHLOROPHYLL A
lig 24
CLA
A
1121 60CHLOROPHYLL A
lig 25
CLA
A
1122 65CHLOROPHYLL A
lig 26
CLA
A
1123 65CHLOROPHYLL A
lig 27
CLA
A
1124 55CHLOROPHYLL A
lig 28
CLA
A
1125 65CHLOROPHYLL A
lig 29
CLA
A
1126 65CHLOROPHYLL A
lig 30
CLA
A
1127 65CHLOROPHYLL A
lig 31
CLA
A
1128 65CHLOROPHYLL A
lig 32
CLA
A
1129 65CHLOROPHYLL A
lig 33
CLA
A
1130 55CHLOROPHYLL A
lig 34
CLA
A
1131 65CHLOROPHYLL A
lig 35
CLA
A
1132 65CHLOROPHYLL A
lig 36
CLA
A
1133 65CHLOROPHYLL A
lig 37
CLA
A
1134 55CHLOROPHYLL A
lig 38
CLA
A
1135 51CHLOROPHYLL A
lig 39
CLA
A
1136 65CHLOROPHYLL A
lig 40
CLA
A
1137 65CHLOROPHYLL A
lig 41
CLA
A
1138 65CHLOROPHYLL A
lig 42
CLA
A
1139 65CHLOROPHYLL A
lig 43
CLA
A
1140 65CHLOROPHYLL A
lig 44
CLA
A
1141 60CHLOROPHYLL A
lig 45
PQN
A
2001 33PHYLLOQUINONE
lig 46
SF4
A
3001 8IRON/SULFUR CLUSTER
lig 47
BCR
A
4002 40BETA-CAROTENE
lig 48
BCR
A
4003 40BETA-CAROTENE
lig 49
BCR
A
4007 40BETA-CAROTENE
lig 50
BCR
A
4008 40BETA-CAROTENE
lig 51
BCR
A
4011 40BETA-CAROTENE
lig 52
BCR
A
4017 40BETA-CAROTENE
lig 53
LHG
A
5001 401,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 54
LHG
A
5002 491,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 55
LMT
A
5004 35DODECYL-BETA-D-MALTOSIDE
lig 56
LMG
A
5006 501,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 57
CA
A
6000 1CALCIUM ION
lig 58
CLA
B
1021 65CHLOROPHYLL A
lig 59
CLA
B
1022 65CHLOROPHYLL A
lig 60
CLA
B
1023 65CHLOROPHYLL A
lig 61
CLA
B
1201 65CHLOROPHYLL A
lig 62
CLA
B
1202 65CHLOROPHYLL A
lig 63
CLA
B
1203 65CHLOROPHYLL A
lig 64
CLA
B
1204 65CHLOROPHYLL A
lig 65
CLA
B
1205 65CHLOROPHYLL A
lig 66
CLA
B
1206 65CHLOROPHYLL A
lig 67
CLA
B
1207 65CHLOROPHYLL A
lig 68
CLA
B
1208 60CHLOROPHYLL A
lig 69
CLA
B
1209 46CHLOROPHYLL A
lig 70
CLA
B
1210 65CHLOROPHYLL A
lig 71
CLA
B
1211 65CHLOROPHYLL A
lig 72
CLA
B
1212 55CHLOROPHYLL A
lig 73
CLA
B
1213 60CHLOROPHYLL A
lig 74
CLA
B
1214 65CHLOROPHYLL A
lig 75
CLA
B
1215 65CHLOROPHYLL A
lig 76
CLA
B
1216 65CHLOROPHYLL A
lig 77
CLA
B
1217 46CHLOROPHYLL A
lig 78
CLA
B
1218 65CHLOROPHYLL A
lig 79
CLA
B
1219 65CHLOROPHYLL A
lig 80
CLA
B
1220 55CHLOROPHYLL A
lig 81
CLA
B
1221 65CHLOROPHYLL A
lig 82
CLA
B
1222 65CHLOROPHYLL A
lig 83
CLA
B
1223 65CHLOROPHYLL A
lig 84
CLA
B
1224 65CHLOROPHYLL A
lig 85
CLA
B
1225 65CHLOROPHYLL A
lig 86
CLA
B
1226 65CHLOROPHYLL A
lig 87
CLA
B
1227 65CHLOROPHYLL A
lig 88
CLA
B
1228 60CHLOROPHYLL A
lig 89
CLA
B
1229 65CHLOROPHYLL A
lig 90
CLA
B
1230 58CHLOROPHYLL A
lig 91
CLA
B
1231 60CHLOROPHYLL A
lig 92
CLA
B
1232 55CHLOROPHYLL A
lig 93
CLA
B
1234 55CHLOROPHYLL A
lig 94
CLA
B
1235 65CHLOROPHYLL A
lig 95
CLA
B
1236 50CHLOROPHYLL A
lig 96
CLA
B
1237 65CHLOROPHYLL A
lig 97
CLA
B
1238 65CHLOROPHYLL A
lig 98
CLA
B
1239 65CHLOROPHYLL A
lig 99
CLA
B
1240 65CHLOROPHYLL A
lig 100
PQN
B
2002 33PHYLLOQUINONE
lig 101
BCR
B
4004 40BETA-CAROTENE
lig 102
BCR
B
4005 40BETA-CAROTENE
lig 103
BCR
B
4006 40BETA-CAROTENE
lig 104
BCR
B
4009 40BETA-CAROTENE
lig 105
BCR
B
4010 40BETA-CAROTENE
lig 106
LHG
B
5001 211,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 107
LHG
B
5002 491,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 108
LMG
B
5003 351,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 109
LMG
B
5004 331,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 110
DGD
B
5005 61DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 111
LMT
B
5006 32DODECYL-BETA-D-MALTOSIDE
lig 112
LMG
B
5007 341,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 113
LMT
B
5008 31DODECYL-BETA-D-MALTOSIDE
lig 114
CA
B
6000 1CALCIUM ION
lig 115
SF4
C
3002 8IRON/SULFUR CLUSTER
lig 116
SF4
C
3003 8IRON/SULFUR CLUSTER
lig 117
CLA
F
1301 65CHLOROPHYLL A
lig 118
CLA
F
1302 65CHLOROPHYLL A
lig 119
BCR
F
4014 40BETA-CAROTENE
lig 120
BCR
F
4016 40BETA-CAROTENE
lig 121
LMG
F
5001 301,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 122
LMG
F
5002 471,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 123
LMG
F
5003 361,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 124
LMG
F
5004 341,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 125
DGD
F
5005 57DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 126
LMG
F
5006 131,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 127
CLA
G
1601 55CHLOROPHYLL A
lig 128
CLA
G
1602 46CHLOROPHYLL A
lig 129
CLA
G
1603 1CHLOROPHYLL A