Analysis of Ligand-Protein Contacts in PDB entry:
6YBZ


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 40 ligands in PDB entry 6YBZ. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NA
A
301 1SODIUM ION
lig 2
LFA
A
302 10EICOSANE
lig 3
BOG
A
303 20OCTYL BETA-D-GLUCOPYRANOSIDE
lig 4
LFA
A
304 6EICOSANE
lig 5
LFA
A
305 16EICOSANE
lig 6
OLC
A
306 15(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 7
RET
A
307 20RETINAL
lig 8
LFA
A
308 18EICOSANE
lig 9
LFA
A
309 14EICOSANE
lig 10
NA
B
301 1SODIUM ION
lig 11
LFA
B
302 12EICOSANE
lig 12
LFA
B
303 18EICOSANE
lig 13
BOG
B
304 20OCTYL BETA-D-GLUCOPYRANOSIDE
lig 14
LFA
B
305 6EICOSANE
lig 15
LFA
B
306 15EICOSANE
lig 16
OLC
B
307 15(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 17
RET
B
308 20RETINAL
lig 18
NA
C
301 1SODIUM ION
lig 19
LFA
C
302 15EICOSANE
lig 20
OLC
C
303 21(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 21
BOG
C
304 20OCTYL BETA-D-GLUCOPYRANOSIDE
lig 22
LFA
C
305 5EICOSANE
lig 23
OLC
C
306 16(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 24
RET
C
307 20RETINAL
lig 25
LFA
C
308 19EICOSANE
lig 26
NA
D
301 1SODIUM ION
lig 27
LFA
D
302 11EICOSANE
lig 28
LFA
D
303 14EICOSANE
lig 29
LFA
D
304 18EICOSANE
lig 30
BOG
D
305 20OCTYL BETA-D-GLUCOPYRANOSIDE
lig 31
LFA
D
306 6EICOSANE
lig 32
OLC
D
307 15(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 33
RET
D
308 20RETINAL
lig 34
NA
E
301 1SODIUM ION
lig 35
LFA
E
302 16EICOSANE
lig 36
LFA
E
303 18EICOSANE
lig 37
BOG
E
304 20OCTYL BETA-D-GLUCOPYRANOSIDE
lig 38
LFA
E
305 6EICOSANE
lig 39
OLC
E
306 15(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 40
RET
E
307 20RETINAL