Analysis of Ligand-Protein Contacts in PDB entry:
6YCE


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 9 ligands in PDB entry 6YCE. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
SCH
A
26 8S-METHYL-THIO-CYSTEINE
lig 2
SCH
B
26 8S-METHYL-THIO-CYSTEINE
lig 3
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
BMA
C
3 11BETA-D-MANNOPYRANOSE
lig 6
XYS
C
4 9ALPHA-D-XYLOPYRANOSE
lig 7
FUC
C
5 10ALPHA-L-FUCOPYRANOSE
lig 8
NAG
B
301 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
IPA
B
302 4ISOPROPYL ALCOHOL