Analysis of Ligand-Protein Contacts in PDB entry:
6YD4


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 15 ligands in PDB entry 6YD4. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
3U0
B
611 142-[4-(CARBAMIMIDAMIDOMETHYL)PHENYL]ETHANOI
lig 2
GGB
B
612 11L-CANAVANINE
lig 3
TBG
B
613 83-METHYL-L-VALINE
lig 4
GGB
B
614 11L-CANAVANINE
lig 5
00S
B
615 114-(AMINOMETHYL)BENZENECARBOXIMIDAMIDE
lig 6
CA
A
601 1CALCIUM ION
lig 7
CA
A
602 1CALCIUM ION
lig 8
CA
A
603 1CALCIUM ION
lig 9
NA
A
604 1SODIUM ION
lig 10
NA
A
605 1SODIUM ION
lig 11
NA
A
606 1SODIUM ION
lig 12
CL
A
607 1CHLORIDE ION
lig 13
PO4
A
608 5PHOSPHATE ION
lig 14
PO4
A
609 5PHOSPHATE ION
lig 15
DMS
A
610 4DIMETHYL SULFOXIDE