Analysis of Ligand-Protein Contacts in PDB entry:
6YGE


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 17 ligands in PDB entry 6YGE. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
C
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
C
4 11ALPHA-D-MANNOPYRANOSE
lig 5
MAN
C
5 11ALPHA-D-MANNOPYRANOSE
lig 6
FUC
C
6 10ALPHA-L-FUCOPYRANOSE
lig 7
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
FUC
D
2 10ALPHA-L-FUCOPYRANOSE
lig 9
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
FUC
E
2 10ALPHA-L-FUCOPYRANOSE
lig 11
NAG
B
301 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
NAG
B
302 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
CA
B
309 1CALCIUM ION
lig 14
ACT
B
310 4ACETATE ION
lig 15
NAG
A
301 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
CA
A
306 1CALCIUM ION
lig 17
ACT
A
307 4ACETATE ION