Analysis of Ligand-Protein Contacts in PDB entry:
6YGF


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 23 ligands in PDB entry 6YGF. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
FUC
C
2 10ALPHA-L-FUCOPYRANOSE
lig 3
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
BMA
D
3 11BETA-D-MANNOPYRANOSE
lig 6
MAN
D
4 11ALPHA-D-MANNOPYRANOSE
lig 7
MAN
D
5 11ALPHA-D-MANNOPYRANOSE
lig 8
FUC
D
6 10ALPHA-L-FUCOPYRANOSE
lig 9
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
FUC
E
2 10ALPHA-L-FUCOPYRANOSE
lig 11
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
FUC
F
3 10ALPHA-L-FUCOPYRANOSE
lig 14
NAG
B
409 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
GOL
B
410 6GLYCEROL
lig 16
GOL
B
411 6GLYCEROL
lig 17
PO4
B
412 5PHOSPHATE ION
lig 18
NAG
A
406 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 19
NCA
A
407 9NICOTINAMIDE
lig 20
AR6
A
408 36 PHOSPHATE
lig 21
GOL
A
409 6GLYCEROL
lig 22
PO4
A
410 5PHOSPHATE ION
lig 23
PO4
A
411 5PHOSPHATE ION