Analysis of Ligand-Protein Contacts in PDB entry:
6YI1


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 45 ligands in PDB entry 6YI1. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
ORT
C
419 10(4~{S})-4-AZANYL-5-OXIDANYLIDENE-PENTANEHY
lig 2
NH2
C
422 1AMINO GROUP
lig 3
ORT
D
422 10(4~{S})-4-AZANYL-5-OXIDANYLIDENE-PENTANEHY
lig 4
NH2
D
425 1AMINO GROUP
lig 5
ORT
E
422 10(4~{S})-4-AZANYL-5-OXIDANYLIDENE-PENTANEHY
lig 6
NH2
E
425 1AMINO GROUP
lig 7
SO4
A
401 5SULFATE ION
lig 8
ZN
A
402 1ZINC ION
lig 9
ZN
A
403 1ZINC ION
lig 10
ZN
A
404 1ZINC ION
lig 11
ZN
A
405 1ZINC ION
lig 12
ZN
A
406 1ZINC ION
lig 13
SO4
A
407 5SULFATE ION
lig 14
SO4
A
408 5SULFATE ION
lig 15
SO4
A
409 5SULFATE ION
lig 16
GOL
A
410 6GLYCEROL
lig 17
GOL
A
411 6GLYCEROL
lig 18
DIO
A
412 61,4-DIETHYLENE DIOXIDE
lig 19
PG4
A
413 13TETRAETHYLENE GLYCOL
lig 20
PG4
A
414 13TETRAETHYLENE GLYCOL
lig 21
PG4
A
415 13TETRAETHYLENE GLYCOL
lig 22
PEG
A
416 7DI(HYDROXYETHYL)ETHER
lig 23
PEG
A
417 7DI(HYDROXYETHYL)ETHER
lig 24
PEG
A
418 7DI(HYDROXYETHYL)ETHER
lig 25
SO4
B
401 5SULFATE ION
lig 26
ZN
B
402 1ZINC ION
lig 27
ZN
B
403 1ZINC ION
lig 28
ZN
B
404 1ZINC ION
lig 29
ZN
B
405 1ZINC ION
lig 30
ZN
B
406 1ZINC ION
lig 31
SO4
B
407 5SULFATE ION
lig 32
SO4
B
408 5SULFATE ION
lig 33
SO4
B
409 5SULFATE ION
lig 34
SO4
B
410 5SULFATE ION
lig 35
GOL
B
411 6GLYCEROL
lig 36
GOL
B
412 6GLYCEROL
lig 37
GOL
B
413 6GLYCEROL
lig 38
PGE
B
414 10TRIETHYLENE GLYCOL
lig 39
PGE
B
415 10TRIETHYLENE GLYCOL
lig 40
PEG
B
416 7DI(HYDROXYETHYL)ETHER
lig 41
PEG
B
417 7DI(HYDROXYETHYL)ETHER
lig 42
SO4
B
418 5SULFATE ION
lig 43
MES
B
419 122-(N-MORPHOLINO)-ETHANESULFONIC ACID
lig 44
MES
B
420 122-(N-MORPHOLINO)-ETHANESULFONIC ACID
lig 45
SO4
B
421 5SULFATE ION