Analysis of Ligand-Protein Contacts in PDB entry:
6YMJ


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 19 ligands in PDB entry 6YMJ. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
CBV
A
101 215-BROMOCYTIDINE 5'-(DIHYDROGEN PHOSPHATE)
lig 2
CBV
F
101 215-BROMOCYTIDINE 5'-(DIHYDROGEN PHOSPHATE)
lig 3
CBV
I
101 215-BROMOCYTIDINE 5'-(DIHYDROGEN PHOSPHATE)
lig 4
CBV
M
101 215-BROMOCYTIDINE 5'-(DIHYDROGEN PHOSPHATE)
lig 5
ADN
A
201 19ADENOSINE
lig 6
ADN
A
202 19ADENOSINE
lig 7
NA
A
203 1SODIUM ION
lig 8
CBV
C
101 215-BROMOCYTIDINE 5'-(DIHYDROGEN PHOSPHATE)
lig 9
ADN
C
102 19ADENOSINE
lig 10
MG
C
103 1MAGNESIUM ION
lig 11
ADN
F
201 19ADENOSINE
lig 12
ADN
F
202 19ADENOSINE
lig 13
ADN
I
201 19ADENOSINE
lig 14
ADN
M
201 19ADENOSINE
lig 15
NA
M
202 1SODIUM ION
lig 16
NA
M
203 1SODIUM ION
lig 17
ADN
N
101 19ADENOSINE
lig 18
CBV
O
101 215-BROMOCYTIDINE 5'-(DIHYDROGEN PHOSPHATE)
lig 19
ADN
O
102 19ADENOSINE