Analysis of Ligand-Protein Contacts in PDB entry:
6YMY


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 16 ligands in PDB entry 6YMY. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
CU
a
601 1COPPER (II) ION
lig 2
HEA
a
602 60HEME-A
lig 3
HEA
a
603 60HEME-A
lig 4
PTY
a
604 35PHOSPHATIDYLETHANOLAMINE
lig 5
PTY
a
605 34PHOSPHATIDYLETHANOLAMINE
lig 6
CN3
a
606 55 PENTAOXA-5,11-DIPHOSPHANONADEC-1-YL UNDEC
lig 7
CUA
b
301 2DINUCLEAR COPPER ION
lig 8
PTY
b
302 40PHOSPHATIDYLETHANOLAMINE
lig 9
PTY
b
303 41PHOSPHATIDYLETHANOLAMINE
lig 10
PTY
c
301 40PHOSPHATIDYLETHANOLAMINE
lig 11
PCF
c
302 431,2-DIACYL-SN-GLYCERO-3-PHOSHOCHOLINE
lig 12
ZN
d
201 1ZINC ION
lig 13
PTY
e
201 32PHOSPHATIDYLETHANOLAMINE
lig 14
PCF
e
202 361,2-DIACYL-SN-GLYCERO-3-PHOSHOCHOLINE
lig 15
PTY
i
101 30PHOSPHATIDYLETHANOLAMINE
lig 16
PCF
m
101 381,2-DIACYL-SN-GLYCERO-3-PHOSHOCHOLINE