Analysis of Ligand-Protein Contacts in PDB entry:
6YPD


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 8 ligands in PDB entry 6YPD. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
KL8
A
401 22 DIHYDRO-1,2-BENZOXABORININ-2-IUM-8-CARBOX
lig 2
PEG
A
402 7DI(HYDROXYETHYL)ETHER
lig 3
DMS
A
403 4DIMETHYL SULFOXIDE
lig 4
EDO
A
404 41,2-ETHANEDIOL
lig 5
PEG
A
405 7DI(HYDROXYETHYL)ETHER
lig 6
EDO
A
406 41,2-ETHANEDIOL
lig 7
CL
A
407 1CHLORIDE ION
lig 8
ZN
A
408 1ZINC ION