Analysis of Ligand-Protein Contacts in PDB entry:
6YR4


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 15 ligands in PDB entry 6YR4. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
HEM
A
401 43PROTOPORPHYRIN IX CONTAINING FE
lig 2
MG
A
402 1MAGNESIUM ION
lig 3
O
A
403 1OXYGEN ATOM
lig 4
HEM
B
401 43PROTOPORPHYRIN IX CONTAINING FE
lig 5
O
B
402 1OXYGEN ATOM
lig 6
HEM
C
401 43PROTOPORPHYRIN IX CONTAINING FE
lig 7
MG
C
402 1MAGNESIUM ION
lig 8
O
C
403 1OXYGEN ATOM
lig 9
HEM
D
401 43PROTOPORPHYRIN IX CONTAINING FE
lig 10
PG4
D
402 13TETRAETHYLENE GLYCOL
lig 11
O
D
403 1OXYGEN ATOM
lig 12
HEM
E
401 43PROTOPORPHYRIN IX CONTAINING FE
lig 13
O
E
402 1OXYGEN ATOM
lig 14
HEM
F
401 43PROTOPORPHYRIN IX CONTAINING FE
lig 15
O
F
402 1OXYGEN ATOM