Analysis of Ligand-Protein Contacts in PDB entry:
6YRC


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 30 ligands in PDB entry 6YRC. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
HEM
A
401 43PROTOPORPHYRIN IX CONTAINING FE
lig 2
7PE
A
402 6 ETHOXY)ETHANOL
lig 3
7PE
A
403 4 ETHOXY)ETHANOL
lig 4
MG
A
404 1MAGNESIUM ION
lig 5
MG
A
405 1MAGNESIUM ION
lig 6
MG
A
406 1MAGNESIUM ION
lig 7
HEM
B
401 43PROTOPORPHYRIN IX CONTAINING FE
lig 8
7PE
B
402 5 ETHOXY)ETHANOL
lig 9
GOL
B
403 6GLYCEROL
lig 10
7PE
B
404 5 ETHOXY)ETHANOL
lig 11
GOL
B
405 6GLYCEROL
lig 12
HEM
C
401 43PROTOPORPHYRIN IX CONTAINING FE
lig 13
GOL
C
402 6GLYCEROL
lig 14
GOL
C
403 6GLYCEROL
lig 15
MG
C
404 1MAGNESIUM ION
lig 16
GOL
C
405 6GLYCEROL
lig 17
HEM
D
401 43PROTOPORPHYRIN IX CONTAINING FE
lig 18
7PE
D
402 6 ETHOXY)ETHANOL
lig 19
HEM
E
401 43PROTOPORPHYRIN IX CONTAINING FE
lig 20
MG
E
402 1MAGNESIUM ION
lig 21
HEM
F
401 43PROTOPORPHYRIN IX CONTAINING FE
lig 22
7PE
F
402 9 ETHOXY)ETHANOL
lig 23
GOL
F
403 6GLYCEROL
lig 24
GOL
F
404 6GLYCEROL
lig 25
7PE
F
405 6 ETHOXY)ETHANOL
lig 26
GOL
F
406 6GLYCEROL
lig 27
GOL
F
407 6GLYCEROL
lig 28
7PE
F
408 5 ETHOXY)ETHANOL
lig 29
7PE
F
409 7 ETHOXY)ETHANOL
lig 30
7PE
F
410 5 ETHOXY)ETHANOL