Analysis of Ligand-Protein Contacts in PDB entry:
6YU8


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 25 ligands in PDB entry 6YU8. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
GOL
A
2101 6GLYCEROL
lig 2
PEG
A
2102 7DI(HYDROXYETHYL)ETHER
lig 3
PEG
A
2103 7DI(HYDROXYETHYL)ETHER
lig 4
GOL
A
2104 6GLYCEROL
lig 5
GOL
A
2105 6GLYCEROL
lig 6
NA
A
2106 1SODIUM ION
lig 7
NA
A
2107 1SODIUM ION
lig 8
NA
A
2108 1SODIUM ION
lig 9
NA
A
2109 1SODIUM ION
lig 10
NA
A
2110 1SODIUM ION
lig 11
NA
A
2111 1SODIUM ION
lig 12
CL
A
2112 1CHLORIDE ION
lig 13
CL
A
2113 1CHLORIDE ION
lig 14
MG
A
2114 1MAGNESIUM ION
lig 15
MG
A
2115 1MAGNESIUM ION
lig 16
GOL
B
201 6GLYCEROL
lig 17
GOL
B
202 6GLYCEROL
lig 18
GOL
B
203 6GLYCEROL
lig 19
PEG
B
204 7DI(HYDROXYETHYL)ETHER
lig 20
NA
B
205 1SODIUM ION
lig 21
NA
B
206 1SODIUM ION
lig 22
NA
B
207 1SODIUM ION
lig 23
NA
B
208 1SODIUM ION
lig 24
NA
B
209 1SODIUM ION
lig 25
CL
B
210 1CHLORIDE ION