Analysis of Ligand-Protein Contacts in PDB entry:
6ZKA


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 33 ligands in PDB entry 6ZKA. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
FME
K
1 10N-FORMYLMETHIONINE
lig 2
FME
L
1 10N-FORMYLMETHIONINE
lig 3
FME
M
1 10N-FORMYLMETHIONINE
lig 4
AYA
V
1 8N-ACETYLALANINE
lig 5
SEP
k
36 10PHOSPHOSERINE
lig 6
PC1
A
201 371,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 7
DCQ
H
501 23 DIONE
lig 8
3PE
H
502 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 9
PC1
H
503 541,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 10
3PE
K
101 401,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 11
3PE
L
701 401,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 12
3PE
L
702 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 13
PC1
L
703 541,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 14
CDL
L
704 100CARDIOLIPIN
lig 15
3PE
L
705 311,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 16
3PE
M
501 441,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 17
PC1
M
502 541,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 18
CDL
M
503 90CARDIOLIPIN
lig 19
3PE
N
401 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 20
3PE
V
201 351,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 21
3PE
V
202 371,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 22
CDL
V
203 94CARDIOLIPIN
lig 23
CDL
V
204 85CARDIOLIPIN
lig 24
CDL
W
201 100CARDIOLIPIN
lig 25
ZMP
X
101 31 BUTANOYL]-BETA-ALANYL}AMINO)ETHYL] TETRAD
lig 26
CDL
Y
201 100CARDIOLIPIN
lig 27
AMP
k
501 23ADENOSINE MONOPHOSPHATE
lig 28
3PE
m
101 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 29
3PE
o
501 311,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 30
CDL
o
502 75CARDIOLIPIN
lig 31
3PE
p
201 271,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 32
MYR
s
201 15MYRISTIC ACID
lig 33
PC1
w
801 541,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE