Analysis of Ligand-Protein Contacts in PDB entry:
6ZKB


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 30 ligands in PDB entry 6ZKB. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
FME
L
1 10N-FORMYLMETHIONINE
lig 2
FME
M
1 10N-FORMYLMETHIONINE
lig 3
AYA
V
1 8N-ACETYLALANINE
lig 4
SEP
k
36 10PHOSPHOSERINE
lig 5
FME
K
1 10N-FORMYLMETHIONINE
lig 6
3PE
L
1001 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 7
PC1
L
1002 541,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 8
CDL
L
1003 100CARDIOLIPIN
lig 9
3PE
L
1004 311,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 10
3PE
M
501 441,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 11
PC1
M
502 541,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 12
CDL
M
503 100CARDIOLIPIN
lig 13
CDL
M
504 90CARDIOLIPIN
lig 14
3PE
N
401 401,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 15
3PE
N
402 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 16
CDL
N
403 75CARDIOLIPIN
lig 17
3PE
V
201 371,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 18
CDL
V
202 94CARDIOLIPIN
lig 19
CDL
V
203 85CARDIOLIPIN
lig 20
CDL
W
201 100CARDIOLIPIN
lig 21
ZMP
X
101 31 BUTANOYL]-BETA-ALANYL}AMINO)ETHYL] TETRAD
lig 22
AMP
k
501 23ADENOSINE MONOPHOSPHATE
lig 23
3PE
o
501 311,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 24
3PE
p
201 271,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 25
MYR
s
201 15MYRISTIC ACID
lig 26
PC1
w
801 541,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 27
3PE
A
201 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 28
PC1
H
401 541,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 29
3PE
J
201 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 30
3PE
J
202 401,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI