Analysis of Ligand-Protein Contacts in PDB entry:
7DBC


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 14 ligands in PDB entry 7DBC. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
GTP
A
501 32GUANOSINE-5'-TRIPHOSPHATE
lig 2
MG
A
502 1MAGNESIUM ION
lig 3
CA
A
503 1CALCIUM ION
lig 4
H1C
B
501 18METHYL ~{N}-(5-BUTYL-1~{H}-BENZIMIDAZOL-2-
lig 5
MG
B
502 1MAGNESIUM ION
lig 6
GDP
B
503 28GUANOSINE-5'-DIPHOSPHATE
lig 7
MES
B
504 122-(N-MORPHOLINO)-ETHANESULFONIC ACID
lig 8
GTP
C
501 32GUANOSINE-5'-TRIPHOSPHATE
lig 9
MG
C
502 1MAGNESIUM ION
lig 10
CA
C
503 1CALCIUM ION
lig 11
GTP
D
501 32GUANOSINE-5'-TRIPHOSPHATE
lig 12
MG
D
502 1MAGNESIUM ION
lig 13
ACP
F
401 31PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE EST
lig 14
MG
F
402 1MAGNESIUM ION