Analysis of Ligand-Protein Contacts in PDB entry:
7DDK


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 39 ligands in PDB entry 7DDK. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
PHD
A
369 12ASPARTYL PHOSPHATE
lig 2
PHD
C
369 12ASPARTYL PHOSPHATE
lig 3
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
H
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
NAG
H
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
I
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
I
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
J
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
J
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
MG
A
1101 1MAGNESIUM ION
lig 12
NA
A
1102 1SODIUM ION
lig 13
MG
A
1103 1MAGNESIUM ION
lig 14
PCW
A
1110 221,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 15
PCW
A
1105 221,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 16
PCW
A
1106 221,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 17
PCW
A
1107 221,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 18
PCW
A
1108 221,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 19
PCW
A
1109 221,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 20
E4R
A
1121 27 CYCLOPENTA[A]PHENANTHRENE-3,14,17-TRIOL
lig 21
CLR
A
1104 28CHOLESTEROL
lig 22
NAG
B
401 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 23
CLR
B
501 28CHOLESTEROL
lig 24
CLR
G
101 28CHOLESTEROL
lig 25
MG
C
1101 1MAGNESIUM ION
lig 26
NA
C
1102 1SODIUM ION
lig 27
MG
C
1103 1MAGNESIUM ION
lig 28
CLR
C
1104 28CHOLESTEROL
lig 29
PCW
C
1106 221,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 30
PCW
C
1107 221,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 31
PCW
C
1108 221,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 32
PCW
C
1109 221,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 33
PCW
C
1110 221,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 34
PCW
C
1111 221,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 35
PCW
C
1112 221,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 36
E4R
C
1121 27 CYCLOPENTA[A]PHENANTHRENE-3,14,17-TRIOL
lig 37
NAG
D
401 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 38
CLR
D
501 28CHOLESTEROL
lig 39
CLR
E
101 28CHOLESTEROL