Analysis of Ligand-Protein Contacts in PDB entry:
7DE5


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 52 ligands in PDB entry 7DE5. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
NAG
B
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
B
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
B
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
B
4 11ALPHA-D-MANNOPYRANOSE
lig 5
MAN
B
5 11ALPHA-D-MANNOPYRANOSE
lig 6
MAN
B
6 11ALPHA-D-MANNOPYRANOSE
lig 7
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
HEM
A
601 43PROTOPORPHYRIN IX CONTAINING FE
lig 10
NAG
A
602 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
NAG
A
603 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
IOD
A
604 1IODIDE ION
lig 13
IOD
A
605 1IODIDE ION
lig 14
IOD
A
606 1IODIDE ION
lig 15
IOD
A
607 1IODIDE ION
lig 16
IOD
A
608 1IODIDE ION
lig 17
IOD
A
609 1IODIDE ION
lig 18
IOD
A
610 1IODIDE ION
lig 19
IOD
A
611 1IODIDE ION
lig 20
IOD
A
612 1IODIDE ION
lig 21
IOD
A
613 1IODIDE ION
lig 22
IOD
A
614 1IODIDE ION
lig 23
SCN
A
615 3THIOCYANATE ION
lig 24
SCN
A
616 3THIOCYANATE ION
lig 25
SCN
A
617 3THIOCYANATE ION
lig 26
SCN
A
618 3THIOCYANATE ION
lig 27
CA
A
619 1CALCIUM ION
lig 28
IOD
A
620 1IODIDE ION
lig 29
IOD
A
621 1IODIDE ION
lig 30
IOD
A
622 1IODIDE ION
lig 31
IOD
A
623 1IODIDE ION
lig 32
IOD
A
624 1IODIDE ION
lig 33
IOD
A
625 1IODIDE ION
lig 34
IOD
A
626 1IODIDE ION
lig 35
IOD
A
628 1IODIDE ION
lig 36
IOD
A
629 1IODIDE ION
lig 37
IOD
A
630 1IODIDE ION
lig 38
IOD
A
631 1IODIDE ION
lig 39
IOD
A
632 1IODIDE ION
lig 40
IOD
A
633 1IODIDE ION
lig 41
IOD
A
634 1IODIDE ION
lig 42
IOD
A
635 1IODIDE ION
lig 43
IOD
A
636 1IODIDE ION
lig 44
IOD
A
637 1IODIDE ION
lig 45
IOD
A
638 1IODIDE ION
lig 46
IOD
A
639 1IODIDE ION
lig 47
IOD
A
640 1IODIDE ION
lig 48
SCN
A
641 3THIOCYANATE ION
lig 49
EDO
A
642 41,2-ETHANEDIOL
lig 50
IOD
A
643 1IODIDE ION
lig 51
IOD
A
644 1IODIDE ION
lig 52
IOD
A
645 1IODIDE ION