Analysis of Ligand-Protein Contacts in PDB entry:
7FD2


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 76 ligands in PDB entry 7FD2. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
D
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
D
4 11ALPHA-D-MANNOPYRANOSE
lig 5
NAG
H
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
NAG
H
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
L
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
L
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
BMA
L
3 11BETA-D-MANNOPYRANOSE
lig 10
NAG
P
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
NAG
P
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
BMA
P
3 11BETA-D-MANNOPYRANOSE
lig 13
MAN
P
4 11ALPHA-D-MANNOPYRANOSE
lig 14
NAG
Q
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
NAG
Q
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
NAG
R
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
NAG
R
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 18
BMA
R
3 11BETA-D-MANNOPYRANOSE
lig 19
NAG
S
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 20
NAG
S
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
BMA
S
3 11BETA-D-MANNOPYRANOSE
lig 22
MAN
S
4 11ALPHA-D-MANNOPYRANOSE
lig 23
NAG
T
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 24
NAG
T
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 25
NAG
U
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 26
NAG
U
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 27
BMA
U
3 11BETA-D-MANNOPYRANOSE
lig 28
NAG
V
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 29
NAG
V
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 30
BMA
V
3 11BETA-D-MANNOPYRANOSE
lig 31
MAN
V
4 11ALPHA-D-MANNOPYRANOSE
lig 32
NAG
W
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 33
NAG
W
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 34
NAG
X
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 35
NAG
X
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 36
BMA
X
3 11BETA-D-MANNOPYRANOSE
lig 37
NAG
A
501 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 38
PCW
A
502 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 39
STE
A
503 20STEARIC ACID
lig 40
PLM
A
504 18PALMITIC ACID
lig 41
CLR
B
501 28CHOLESTEROL
lig 42
CLR
B
502 28CHOLESTEROL
lig 43
CLR
B
503 28CHOLESTEROL
lig 44
PLM
B
504 18PALMITIC ACID
lig 45
STE
B
505 20STEARIC ACID
lig 46
PLM
B
506 18PALMITIC ACID
lig 47
NAG
E
501 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 48
PCW
E
502 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 49
STE
E
503 20STEARIC ACID
lig 50
PLM
E
504 18PALMITIC ACID
lig 51
CLR
F
501 28CHOLESTEROL
lig 52
CLR
F
502 28CHOLESTEROL
lig 53
CLR
F
503 28CHOLESTEROL
lig 54
PLM
F
504 18PALMITIC ACID
lig 55
STE
F
505 20STEARIC ACID
lig 56
PLM
F
506 18PALMITIC ACID
lig 57
NAG
I
501 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 58
PCW
I
502 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 59
CLR
I
503 28CHOLESTEROL
lig 60
PLM
I
504 18PALMITIC ACID
lig 61
STE
J
501 20STEARIC ACID
lig 62
CLR
J
502 28CHOLESTEROL
lig 63
CLR
J
503 28CHOLESTEROL
lig 64
PLM
J
504 18PALMITIC ACID
lig 65
STE
J
505 20STEARIC ACID
lig 66
PLM
J
506 18PALMITIC ACID
lig 67
NAG
M
501 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 68
PCW
M
502 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 69
STE
M
503 20STEARIC ACID
lig 70
PLM
M
504 18PALMITIC ACID
lig 71
CLR
N
501 28CHOLESTEROL
lig 72
CLR
N
502 28CHOLESTEROL
lig 73
CLR
N
503 28CHOLESTEROL
lig 74
PLM
N
504 18PALMITIC ACID
lig 75
STE
N
505 20STEARIC ACID
lig 76
PLM
N
506 18PALMITIC ACID