Analysis of Ligand-Protein Contacts in PDB entry:
7NYC


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 20 ligands in PDB entry 7NYC. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
K
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
K
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
J
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
J
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
BMA
J
3 11BETA-D-MANNOPYRANOSE
lig 6
MAN
C
901 11ALPHA-D-MANNOPYRANOSE
lig 7
MAN
D
601 11ALPHA-D-MANNOPYRANOSE
lig 8
MAN
D
602 11ALPHA-D-MANNOPYRANOSE
lig 9
CA
D
603 1CALCIUM ION
lig 10
MAN
E
601 11ALPHA-D-MANNOPYRANOSE
lig 11
MAN
E
602 11ALPHA-D-MANNOPYRANOSE
lig 12
MAN
E
603 11ALPHA-D-MANNOPYRANOSE
lig 13
NAG
E
604 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
CA
E
605 1CALCIUM ION
lig 15
MAN
G
701 11ALPHA-D-MANNOPYRANOSE
lig 16
NAG
G
702 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
FUC
B
1001 10ALPHA-L-FUCOPYRANOSE
lig 18
NAG
B
1002 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 19
NAG
H
601 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 20
CA
H
602 1CALCIUM ION