Analysis of Ligand-Protein Contacts in PDB entry:
7PD2


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 15 ligands in PDB entry 7PD2. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
SF4
A
401 8IRON/SULFUR CLUSTER
lig 2
5AD
A
402 185'-DEOXYADENOSINE
lig 3
MET
A
403 9METHIONINE
lig 4
GOL
A
404 6GLYCEROL
lig 5
GOL
A
405 6GLYCEROL
lig 6
SO4
A
406 5SULFATE ION
lig 7
SO4
A
407 5SULFATE ION
lig 8
SO4
A
408 5SULFATE ION
lig 9
SF4
B
401 8IRON/SULFUR CLUSTER
lig 10
5AD
B
402 185'-DEOXYADENOSINE
lig 11
MET
B
403 9METHIONINE
lig 12
GOL
B
404 6GLYCEROL
lig 13
SO4
B
405 5SULFATE ION
lig 14
SO4
B
406 5SULFATE ION
lig 15
SO4
B
407 5SULFATE ION