Analysis of Ligand-Protein Contacts in PDB entry:
7QIY


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 68 ligands in PDB entry 7QIY. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
PSU
2
1178 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 2
PSU
2
1184 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 3
PSU
2
1190 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 4
I2T
2
1194 28 ACID
lig 5
PSU
2
1210 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 6
PSU
2
1217 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 7
OMC
2
1218 21O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE
lig 8
OMU
2
1263 21O2'-METHYLURIDINE 5'-MONOPHOSPHATE
lig 9
OMU
2
1265 21O2'-METHYLURIDINE 5'-MONOPHOSPHATE
lig 10
OMU
2
1272 21O2'-METHYLURIDINE 5'-MONOPHOSPHATE
lig 11
OMG
2
1274 24O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE
lig 12
4AC
2
1282 23N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE
lig 13
PSU
2
1292 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 14
PSU
2
1303 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 15
PSU
2
1307 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 16
PSU
2
1312 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 17
A2M
2
1328 232'-O-METHYLADENOSINE 5'-(DIHYDROGEN PHOSPH
lig 18
OMU
2
1382 21O2'-METHYLURIDINE 5'-MONOPHOSPHATE
lig 19
OMG
2
1432 24O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE
lig 20
OMU
2
1446 21O2'-METHYLURIDINE 5'-MONOPHOSPHATE
lig 21
PSU
2
1484 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 22
PSU
2
1534 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 23
PSU
2
1537 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 24
PSU
2
1566 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 25
A2M
2
1578 232'-O-METHYLADENOSINE 5'-(DIHYDROGEN PHOSPH
lig 26
7MG
2
1580 247N-METHYL-8-HYDROGUANOSINE-5'-MONOPHOSPHAT
lig 27
PSU
2
1633 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 28
K
2
1901 1POTASSIUM ION
lig 29
K
2
1902 1POTASSIUM ION
lig 30
K
2
1903 1POTASSIUM ION
lig 31
K
2
1904 1POTASSIUM ION
lig 32
K
2
1905 1POTASSIUM ION
lig 33
K
2
1906 1POTASSIUM ION
lig 34
K
2
1907 1POTASSIUM ION
lig 35
PUT
2
1908 61,4-DIAMINOBUTANE
lig 36
MG
2
1909 1MAGNESIUM ION
lig 37
MG
2
1910 1MAGNESIUM ION
lig 38
MG
2
1911 1MAGNESIUM ION
lig 39
MG
2
1912 1MAGNESIUM ION
lig 40
MG
2
1913 1MAGNESIUM ION
lig 41
MG
2
1914 1MAGNESIUM ION
lig 42
MG
2
1915 1MAGNESIUM ION
lig 43
MG
2
1916 1MAGNESIUM ION
lig 44
MG
2
1917 1MAGNESIUM ION
lig 45
MG
2
1918 1MAGNESIUM ION
lig 46
MG
2
1919 1MAGNESIUM ION
lig 47
MG
2
1920 1MAGNESIUM ION
lig 48
MG
2
1921 1MAGNESIUM ION
lig 49
MG
2
1922 1MAGNESIUM ION
lig 50
MG
2
1923 1MAGNESIUM ION
lig 51
MG
2
1924 1MAGNESIUM ION
lig 52
MG
2
1925 1MAGNESIUM ION
lig 53
MG
2
1926 1MAGNESIUM ION
lig 54
MG
2
1927 1MAGNESIUM ION
lig 55
MG
2
1928 1MAGNESIUM ION
lig 56
MG
2
1929 1MAGNESIUM ION
lig 57
MG
2
1930 1MAGNESIUM ION
lig 58
MG
2
1931 1MAGNESIUM ION
lig 59
MG
2
1932 1MAGNESIUM ION
lig 60
MG
2
1933 1MAGNESIUM ION
lig 61
MG
2
1934 1MAGNESIUM ION
lig 62
MG
2
1935 1MAGNESIUM ION
lig 63
BGC
D
301 11BETA-D-GLUCOPYRANOSE
lig 64
K
J
201 1POTASSIUM ION
lig 65
MG
J
202 1MAGNESIUM ION
lig 66
K
K
201 1POTASSIUM ION
lig 67
K
N
101 1POTASSIUM ION
lig 68
ZN
N
102 1ZINC ION