Analysis of Ligand-Protein Contacts in PDB entry:
7R4F


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 53 ligands in PDB entry 7R4F. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
FME
A
1 10N-FORMYLMETHIONINE
lig 2
2MR
D
85 13N3, N4-DIMETHYLARGININE
lig 3
FME
H
1 10N-FORMYLMETHIONINE
lig 4
FME
K
1 10N-FORMYLMETHIONINE
lig 5
FME
L
1 10N-FORMYLMETHIONINE
lig 6
FME
M
1 10N-FORMYLMETHIONINE
lig 7
FME
N
1 10N-FORMYLMETHIONINE
lig 8
SAC
i
1 9N-ACETYL-SERINE
lig 9
AYA
r
1 8N-ACETYLALANINE
lig 10
LMT
A
301 35DODECYL-BETA-D-MALTOSIDE
lig 11
PC1
A
302 521,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 12
SF4
B
201 8IRON/SULFUR CLUSTER
lig 13
PC1
B
202 351,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 14
FES
E
301 4FE2/S2 (INORGANIC) CLUSTER
lig 15
FMN
F
501 31FLAVIN MONONUCLEOTIDE
lig 16
SF4
F
502 8IRON/SULFUR CLUSTER
lig 17
SF4
G
801 8IRON/SULFUR CLUSTER
lig 18
SF4
G
802 8IRON/SULFUR CLUSTER
lig 19
FES
G
803 4FE2/S2 (INORGANIC) CLUSTER
lig 20
K
G
804 1POTASSIUM ION
lig 21
3PE
H
901 481,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 22
3PE
H
902 251,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 23
3PE
H
903 341,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 24
3PE
I
201 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 25
SF4
I
202 8IRON/SULFUR CLUSTER
lig 26
SF4
I
203 8IRON/SULFUR CLUSTER
lig 27
LMT
J
201 35DODECYL-BETA-D-MALTOSIDE
lig 28
LMT
K
901 35DODECYL-BETA-D-MALTOSIDE
lig 29
3PE
L
701 491,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 30
CDL
L
702 69CARDIOLIPIN
lig 31
3PE
L
703 451,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 32
3PE
M
1301 331,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 33
PC1
M
1302 401,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 34
CDL
N
1101 61CARDIOLIPIN
lig 35
I49
N
1102 17 ETHYL]GUANIDINE
lig 36
GTP
O
401 32GUANOSINE-5'-TRIPHOSPHATE
lig 37
MG
O
402 1MAGNESIUM ION
lig 38
NDP
P
501 48 PHOSPHATE
lig 39
ZN
R
201 1ZINC ION
lig 40
EHZ
T
101 37 (3~{S})-3-OXIDANYLTETRADECANETHIOATE
lig 41
EHZ
U
101 37 (3~{S})-3-OXIDANYLTETRADECANETHIOATE
lig 42
CDL
X
201 52CARDIOLIPIN
lig 43
3PE
Y
601 351,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 44
3PE
Z
301 331,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 45
3PE
d
1201 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 46
CDL
d
1202 65CARDIOLIPIN
lig 47
LMT
f
1101 35DODECYL-BETA-D-MALTOSIDE
lig 48
CDL
h
1001 67CARDIOLIPIN
lig 49
LMT
h
1002 35DODECYL-BETA-D-MALTOSIDE
lig 50
LMT
l
201 35DODECYL-BETA-D-MALTOSIDE
lig 51
MYR
o
201 15MYRISTIC ACID
lig 52
LMT
p
201 35DODECYL-BETA-D-MALTOSIDE
lig 53
CDL
r
201 76CARDIOLIPIN