Analysis of Ligand-Protein Contacts in PDB entry:
7SMQ


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 47 ligands in PDB entry 7SMQ. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
F
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
F
4 11ALPHA-D-MANNOPYRANOSE
lig 5
MAN
F
5 11ALPHA-D-MANNOPYRANOSE
lig 6
MAN
F
6 11ALPHA-D-MANNOPYRANOSE
lig 7
MAN
F
7 11ALPHA-D-MANNOPYRANOSE
lig 8
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
G
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
BMA
G
3 11BETA-D-MANNOPYRANOSE
lig 11
NAG
H
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
NAG
H
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
NAG
I
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
NAG
I
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
BMA
I
3 11BETA-D-MANNOPYRANOSE
lig 16
MAN
I
4 11ALPHA-D-MANNOPYRANOSE
lig 17
MAN
I
5 11ALPHA-D-MANNOPYRANOSE
lig 18
MAN
I
6 11ALPHA-D-MANNOPYRANOSE
lig 19
MAN
I
7 11ALPHA-D-MANNOPYRANOSE
lig 20
NAG
J
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
NAG
J
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 22
BMA
J
3 11BETA-D-MANNOPYRANOSE
lig 23
MAN
J
4 11ALPHA-D-MANNOPYRANOSE
lig 24
MAN
J
5 11ALPHA-D-MANNOPYRANOSE
lig 25
POV
A
501 46 ENOYLOXY]PROPYL 2-(TRIMETHYLAMMONIO)ETHYL
lig 26
CLR
A
502 28CHOLESTEROL
lig 27
CLR
A
503 28CHOLESTEROL
lig 28
NAG
B
601 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 29
NAG
B
602 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 30
POV
B
603 35 ENOYLOXY]PROPYL 2-(TRIMETHYLAMMONIO)ETHYL
lig 31
POV
B
604 37 ENOYLOXY]PROPYL 2-(TRIMETHYLAMMONIO)ETHYL
lig 32
CLR
B
605 28CHOLESTEROL
lig 33
CLR
B
606 28CHOLESTEROL
lig 34
DD9
B
607 8NONANE
lig 35
CLR
C
501 28CHOLESTEROL
lig 36
CLR
C
502 28CHOLESTEROL
lig 37
CLR
C
503 28CHOLESTEROL
lig 38
POV
D
501 32 ENOYLOXY]PROPYL 2-(TRIMETHYLAMMONIO)ETHYL
lig 39
CLR
D
502 28CHOLESTEROL
lig 40
CLR
D
503 28CHOLESTEROL
lig 41
POV
D
504 47 ENOYLOXY]PROPYL 2-(TRIMETHYLAMMONIO)ETHYL
lig 42
POV
D
505 35 ENOYLOXY]PROPYL 2-(TRIMETHYLAMMONIO)ETHYL
lig 43
NAG
E
501 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 44
POV
E
502 40 ENOYLOXY]PROPYL 2-(TRIMETHYLAMMONIO)ETHYL
lig 45
POV
E
503 35 ENOYLOXY]PROPYL 2-(TRIMETHYLAMMONIO)ETHYL
lig 46
CLR
E
504 28CHOLESTEROL
lig 47
CLR
E
505 28CHOLESTEROL