Analysis of Ligand-Protein Contacts in PDB entry:
7THU

Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOTHREONINE (TPO) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.

There are 155 ligands in PDB entry 7THU. Click on ligand of interest for LPC analysis.

	HET ID	Chain ID	Residue N	Number of atoms	Ligand name
lig 1	FME	A	1	10	N-FORMYLMETHIONINE
lig 2	FME	B	1	10	N-FORMYLMETHIONINE
lig 3	TPO	G	11	11	PHOSPHOTHREONINE
lig 4	FME	N	1	10	N-FORMYLMETHIONINE
lig 5	FME	O	1	10	N-FORMYLMETHIONINE
lig 6	TPO	T	11	11	PHOSPHOTHREONINE
lig 7	CU	A	601	1	COPPER (II) ION
lig 8	MG	A	602	1	MAGNESIUM ION
lig 9	NA	A	603	1	SODIUM ION
lig 10	PGV	A	604	51	OCTADEC-11-ENOATE
lig 11	PGV	A	605	51	OCTADEC-11-ENOATE
lig 12	HEA	A	606	60	HEME-A
lig 13	HEA	A	607	60	HEME-A
lig 14	EDO	A	608	4	1,2-ETHANEDIOL
lig 15	EDO	A	609	4	1,2-ETHANEDIOL
lig 16	EDO	A	610	4	1,2-ETHANEDIOL
lig 17	EDO	A	611	4	1,2-ETHANEDIOL
lig 18	EDO	A	612	4	1,2-ETHANEDIOL
lig 19	EDO	A	613	4	1,2-ETHANEDIOL
lig 20	EDO	A	614	4	1,2-ETHANEDIOL
lig 21	TGL	A	615	63	TRISTEAROYLGLYCEROL
lig 22	EDO	A	616	4	1,2-ETHANEDIOL
lig 23	EDO	A	617	4	1,2-ETHANEDIOL
lig 24	EDO	A	618	4	1,2-ETHANEDIOL
lig 25	EDO	A	619	4	1,2-ETHANEDIOL
lig 26	EDO	A	620	4	1,2-ETHANEDIOL
lig 27	CUA	B	301	2	DINUCLEAR COPPER ION
lig 28	CHD	B	302	29	CHOLIC ACID
lig 29	EDO	B	303	4	1,2-ETHANEDIOL
lig 30	EDO	B	304	4	1,2-ETHANEDIOL
lig 31	EDO	B	305	4	1,2-ETHANEDIOL
lig 32	EDO	B	306	4	1,2-ETHANEDIOL
lig 33	EDO	B	307	4	1,2-ETHANEDIOL
lig 34	EDO	B	308	4	1,2-ETHANEDIOL
lig 35	EDO	B	309	4	1,2-ETHANEDIOL
lig 36	DMU	C	301	33	DECYL-BETA-D-MALTOPYRANOSIDE
lig 37	CHD	C	302	29	CHOLIC ACID
lig 38	PEK	C	303	53	11,14-TETRAENOATE
lig 39	PEK	C	304	53	11,14-TETRAENOATE
lig 40	PGV	C	305	51	OCTADEC-11-ENOATE
lig 41	CDL	C	306	100	CARDIOLIPIN
lig 42	CHD	C	307	29	CHOLIC ACID
lig 43	EDO	C	308	4	1,2-ETHANEDIOL
lig 44	EDO	C	309	4	1,2-ETHANEDIOL
lig 45	EDO	C	310	4	1,2-ETHANEDIOL
lig 46	EDO	C	311	4	1,2-ETHANEDIOL
lig 47	CDL	C	312	100	CARDIOLIPIN
lig 48	DMU	C	313	33	DECYL-BETA-D-MALTOPYRANOSIDE
lig 49	EDO	C	314	4	1,2-ETHANEDIOL
lig 50	PEK	C	315	53	11,14-TETRAENOATE
lig 51	TGL	D	201	63	TRISTEAROYLGLYCEROL
lig 52	EDO	D	202	4	1,2-ETHANEDIOL
lig 53	EDO	D	203	4	1,2-ETHANEDIOL
lig 54	EDO	D	204	4	1,2-ETHANEDIOL
lig 55	EDO	D	205	4	1,2-ETHANEDIOL
lig 56	EDO	D	206	4	1,2-ETHANEDIOL
lig 57	EDO	D	207	4	1,2-ETHANEDIOL
lig 58	EDO	D	208	4	1,2-ETHANEDIOL
lig 59	PSC	E	201	52	17,20-DIEN-1-AMINIUM 4-OXIDE
lig 60	EDO	E	202	4	1,2-ETHANEDIOL
lig 61	EDO	E	203	4	1,2-ETHANEDIOL
lig 62	EDO	E	204	4	1,2-ETHANEDIOL
lig 63	EDO	E	205	4	1,2-ETHANEDIOL
lig 64	EDO	F	701	4	1,2-ETHANEDIOL
lig 65	EDO	F	702	4	1,2-ETHANEDIOL
lig 66	ZN	F	703	1	ZINC ION
lig 67	EDO	F	704	4	1,2-ETHANEDIOL
lig 68	EDO	F	705	4	1,2-ETHANEDIOL
lig 69	EDO	G	1301	4	1,2-ETHANEDIOL
lig 70	DMU	G	1302	33	DECYL-BETA-D-MALTOPYRANOSIDE
lig 71	EDO	G	1303	4	1,2-ETHANEDIOL
lig 72	EDO	G	1304	4	1,2-ETHANEDIOL
lig 73	CHD	G	1305	29	CHOLIC ACID
lig 74	EDO	G	1306	4	1,2-ETHANEDIOL
lig 75	SAC	I	101	9	N-ACETYL-SERINE
lig 76	EDO	I	102	4	1,2-ETHANEDIOL
lig 77	EDO	I	103	4	1,2-ETHANEDIOL
lig 78	EDO	J	1101	4	1,2-ETHANEDIOL
lig 79	CHD	J	1102	29	CHOLIC ACID
lig 80	EDO	J	1103	4	1,2-ETHANEDIOL
lig 81	EDO	J	1104	4	1,2-ETHANEDIOL
lig 82	EDO	J	1105	4	1,2-ETHANEDIOL
lig 83	EDO	K	101	4	1,2-ETHANEDIOL
lig 84	EDO	K	102	4	1,2-ETHANEDIOL
lig 85	TGL	L	101	63	TRISTEAROYLGLYCEROL
lig 86	EDO	L	102	4	1,2-ETHANEDIOL
lig 87	DMU	M	101	33	DECYL-BETA-D-MALTOPYRANOSIDE
lig 88	EDO	M	102	4	1,2-ETHANEDIOL
lig 89	CU	N	601	1	COPPER (II) ION
lig 90	MG	N	602	1	MAGNESIUM ION
lig 91	NA	N	603	1	SODIUM ION
lig 92	TGL	N	604	63	TRISTEAROYLGLYCEROL
lig 93	PGV	N	605	51	OCTADEC-11-ENOATE
lig 94	HEA	N	606	60	HEME-A
lig 95	HEA	N	607	60	HEME-A
lig 96	EDO	N	608	4	1,2-ETHANEDIOL
lig 97	EDO	N	609	4	1,2-ETHANEDIOL
lig 98	EDO	N	610	4	1,2-ETHANEDIOL
lig 99	EDO	N	611	4	1,2-ETHANEDIOL
lig 100	EDO	N	612	4	1,2-ETHANEDIOL
lig 101	EDO	N	613	4	1,2-ETHANEDIOL
lig 102	EDO	N	614	4	1,2-ETHANEDIOL
lig 103	EDO	N	615	4	1,2-ETHANEDIOL
lig 104	PGV	N	616	51	OCTADEC-11-ENOATE
lig 105	EDO	N	617	4	1,2-ETHANEDIOL
lig 106	EDO	N	618	4	1,2-ETHANEDIOL
lig 107	EDO	N	619	4	1,2-ETHANEDIOL
lig 108	EDO	N	620	4	1,2-ETHANEDIOL
lig 109	CUA	O	301	2	DINUCLEAR COPPER ION
lig 110	PSC	O	302	52	17,20-DIEN-1-AMINIUM 4-OXIDE
lig 111	EDO	O	303	4	1,2-ETHANEDIOL
lig 112	EDO	O	304	4	1,2-ETHANEDIOL
lig 113	PEK	P	301	53	11,14-TETRAENOATE
lig 114	DMU	P	302	33	DECYL-BETA-D-MALTOPYRANOSIDE
lig 115	CHD	P	303	29	CHOLIC ACID
lig 116	PEK	P	304	53	11,14-TETRAENOATE
lig 117	PEK	P	305	53	11,14-TETRAENOATE
lig 118	PGV	P	306	51	OCTADEC-11-ENOATE
lig 119	CDL	P	307	100	CARDIOLIPIN
lig 120	CHD	P	308	29	CHOLIC ACID
lig 121	EDO	P	309	4	1,2-ETHANEDIOL
lig 122	EDO	P	310	4	1,2-ETHANEDIOL
lig 123	EDO	P	311	4	1,2-ETHANEDIOL
lig 124	TGL	Q	201	63	TRISTEAROYLGLYCEROL
lig 125	EDO	Q	202	4	1,2-ETHANEDIOL
lig 126	EDO	Q	203	4	1,2-ETHANEDIOL
lig 127	EDO	Q	204	4	1,2-ETHANEDIOL
lig 128	EDO	R	201	4	1,2-ETHANEDIOL
lig 129	EDO	R	202	4	1,2-ETHANEDIOL
lig 130	EDO	S	2201	4	1,2-ETHANEDIOL
lig 131	ZN	S	2202	1	ZINC ION
lig 132	EDO	S	2203	4	1,2-ETHANEDIOL
lig 133	EDO	S	2204	4	1,2-ETHANEDIOL
lig 134	EDO	S	2205	4	1,2-ETHANEDIOL
lig 135	EDO	S	2206	4	1,2-ETHANEDIOL
lig 136	EDO	S	2207	4	1,2-ETHANEDIOL
lig 137	PGV	T	101	51	OCTADEC-11-ENOATE
lig 138	CDL	T	102	100	CARDIOLIPIN
lig 139	EDO	T	103	4	1,2-ETHANEDIOL
lig 140	CHD	T	104	29	CHOLIC ACID
lig 141	EDO	T	105	4	1,2-ETHANEDIOL
lig 142	EDO	U	1501	4	1,2-ETHANEDIOL
lig 143	SAC	V	101	9	N-ACETYL-SERINE
lig 144	EDO	V	102	4	1,2-ETHANEDIOL
lig 145	EDO	V	103	4	1,2-ETHANEDIOL
lig 146	EDO	V	104	4	1,2-ETHANEDIOL
lig 147	EDO	W	301	4	1,2-ETHANEDIOL
lig 148	CHD	W	302	29	CHOLIC ACID
lig 149	EDO	W	303	4	1,2-ETHANEDIOL
lig 150	EDO	W	304	4	1,2-ETHANEDIOL
lig 151	TGL	Y	101	63	TRISTEAROYLGLYCEROL
lig 152	CHD	Y	102	29	CHOLIC ACID
lig 153	DMU	Z	101	33	DECYL-BETA-D-MALTOPYRANOSIDE
lig 154	PGV	Z	102	51	OCTADEC-11-ENOATE
lig 155	EDO	Z	103	4	1,2-ETHANEDIOL

Analysis of Ligand-Protein Contacts in PDB entry: 7THU

Analysis of Ligand-Protein Contacts in PDB entry:
7THU