Analysis of Ligand-Protein Contacts in PDB entry:
7AFL


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 31 ligands in PDB entry 7AFL. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
PSU
A
516 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 2
G7M
A
527 24N7-METHYL-GUANOSINE-5'-MONOPHOSPHATE
lig 3
2MG
A
1516 242N-METHYLGUANOSINE-5'-MONOPHOSPHATE
lig 4
MA6
A
1518 246N-DIMETHYLADENOSINE-5'-MONOPHOSHATE
lig 5
MA6
A
1519 246N-DIMETHYLADENOSINE-5'-MONOPHOSHATE
lig 6
D2T
L
89 10(3R)-3-(METHYLSULFANYL)-L-ASPARTIC ACID
lig 7
MG
A
1601 1MAGNESIUM ION
lig 8
MG
A
1602 1MAGNESIUM ION
lig 9
MG
A
1603 1MAGNESIUM ION
lig 10
MG
A
1604 1MAGNESIUM ION
lig 11
MG
A
1605 1MAGNESIUM ION
lig 12
MG
A
1606 1MAGNESIUM ION
lig 13
MG
A
1607 1MAGNESIUM ION
lig 14
MG
A
1608 1MAGNESIUM ION
lig 15
MG
A
1609 1MAGNESIUM ION
lig 16
MG
A
1610 1MAGNESIUM ION
lig 17
MG
A
1611 1MAGNESIUM ION
lig 18
MG
A
1612 1MAGNESIUM ION
lig 19
MG
A
1613 1MAGNESIUM ION
lig 20
MG
A
1614 1MAGNESIUM ION
lig 21
MG
A
1615 1MAGNESIUM ION
lig 22
MG
A
1616 1MAGNESIUM ION
lig 23
MG
A
1617 1MAGNESIUM ION
lig 24
MG
A
1618 1MAGNESIUM ION
lig 25
MG
A
1619 1MAGNESIUM ION
lig 26
MG
A
1620 1MAGNESIUM ION
lig 27
MG
A
1621 1MAGNESIUM ION
lig 28
MG
A
1622 1MAGNESIUM ION
lig 29
MG
A
1623 1MAGNESIUM ION
lig 30
MG
A
1624 1MAGNESIUM ION
lig 31
MG
A
1625 1MAGNESIUM ION